PrecisionFDA
Truth Challenge
Engage and improve DNA test results with our community challenges
Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
| Entry | Type | Subtype | Subset | Genotype | F-score | Recall | Precision | Frac_NA | Truth TP | Truth FN | Query TP | Query FP | FP gt | % FP ma | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
43851-43900 / 86044 show all | |||||||||||||||
| gduggal-snapfb | INDEL | D6_15 | map_l100_m2_e1 | * | 75.6012 | 62.9091 | 94.7090 | 81.7919 | 173 | 102 | 179 | 10 | 9 | 90.0000 | |
| gduggal-snapfb | INDEL | D6_15 | map_l100_m2_e1 | het | 79.7221 | 68.1481 | 96.0317 | 76.1815 | 92 | 43 | 121 | 5 | 4 | 80.0000 | |
| gduggal-snapfb | INDEL | D6_15 | map_l100_m2_e1 | hetalt | 58.9560 | 43.8356 | 90.0000 | 72.9730 | 32 | 41 | 9 | 1 | 1 | 100.0000 | |
| gduggal-snapfb | INDEL | D6_15 | map_l100_m2_e1 | homalt | 81.6667 | 73.1343 | 92.4528 | 88.7712 | 49 | 18 | 49 | 4 | 4 | 100.0000 | |
| gduggal-snapfb | INDEL | D6_15 | map_l125_m0_e0 | * | 79.6826 | 70.2128 | 92.1053 | 89.7849 | 33 | 14 | 35 | 3 | 3 | 100.0000 | |
| gduggal-snapfb | INDEL | D6_15 | map_l125_m0_e0 | het | 80.3709 | 68.9655 | 96.2963 | 85.1648 | 20 | 9 | 26 | 1 | 1 | 100.0000 | |
| gduggal-snapfb | INDEL | D6_15 | map_l125_m0_e0 | hetalt | 66.6667 | 100.0000 | 4 | 2 | 0 | 0 | 0 | ||||
| gduggal-snapfb | INDEL | D6_15 | map_l125_m0_e0 | homalt | 78.2609 | 75.0000 | 81.8182 | 93.9891 | 9 | 3 | 9 | 2 | 2 | 100.0000 | |
| gduggal-snapfb | INDEL | D6_15 | map_l125_m1_e0 | * | 83.1665 | 75.2137 | 93.0000 | 84.8485 | 88 | 29 | 93 | 7 | 6 | 85.7143 | |
| gduggal-snapfb | INDEL | D6_15 | map_l125_m1_e0 | het | 85.4139 | 78.1250 | 94.2029 | 79.5252 | 50 | 14 | 65 | 4 | 3 | 75.0000 | |
| gduggal-snapfb | INDEL | D6_15 | map_l125_m1_e0 | hetalt | 81.2500 | 68.4211 | 100.0000 | 82.3529 | 13 | 6 | 3 | 0 | 0 | ||
| gduggal-snapfb | INDEL | D6_15 | map_l125_m1_e0 | homalt | 80.6452 | 73.5294 | 89.2857 | 90.8497 | 25 | 9 | 25 | 3 | 3 | 100.0000 | |
| gduggal-snapfb | INDEL | D6_15 | map_l125_m2_e0 | * | 83.4615 | 75.3968 | 93.4579 | 84.7795 | 95 | 31 | 100 | 7 | 6 | 85.7143 | |
| gduggal-snapfb | INDEL | D6_15 | map_l125_m2_e0 | het | 85.1770 | 77.4648 | 94.5946 | 79.8365 | 55 | 16 | 70 | 4 | 3 | 75.0000 | |
| gduggal-snapfb | INDEL | D6_15 | map_l125_m2_e0 | hetalt | 81.2500 | 68.4211 | 100.0000 | 83.3333 | 13 | 6 | 3 | 0 | 0 | ||
| gduggal-snapfb | INDEL | D6_15 | map_l125_m2_e0 | homalt | 81.8182 | 75.0000 | 90.0000 | 90.5660 | 27 | 9 | 27 | 3 | 3 | 100.0000 | |
| gduggal-snapfb | INDEL | D6_15 | map_l125_m2_e1 | * | 83.2418 | 75.0000 | 93.5185 | 84.8739 | 96 | 32 | 101 | 7 | 6 | 85.7143 | |
| gduggal-snapfb | INDEL | D6_15 | map_l125_m2_e1 | het | 85.1770 | 77.4648 | 94.5946 | 79.9458 | 55 | 16 | 70 | 4 | 3 | 75.0000 | |
| gduggal-snapfb | INDEL | D6_15 | map_l125_m2_e1 | hetalt | 78.7879 | 65.0000 | 100.0000 | 85.0000 | 13 | 7 | 3 | 0 | 0 | ||
| gduggal-snapfb | INDEL | D6_15 | map_l125_m2_e1 | homalt | 82.3529 | 75.6757 | 90.3226 | 90.4615 | 28 | 9 | 28 | 3 | 3 | 100.0000 | |
| gduggal-snapfb | INDEL | D6_15 | map_l150_m0_e0 | * | 78.8060 | 68.7500 | 92.3077 | 91.5309 | 22 | 10 | 24 | 2 | 2 | 100.0000 | |
| gduggal-snapfb | INDEL | D6_15 | map_l150_m0_e0 | het | 77.1875 | 65.0000 | 95.0000 | 85.9155 | 13 | 7 | 19 | 1 | 1 | 100.0000 | |
| gduggal-snapfb | INDEL | D6_15 | map_l150_m0_e0 | hetalt | 80.0000 | 100.0000 | 4 | 1 | 0 | 0 | 0 | ||||
| gduggal-snapfb | INDEL | D6_15 | map_l150_m0_e0 | homalt | 76.9231 | 71.4286 | 83.3333 | 96.2264 | 5 | 2 | 5 | 1 | 1 | 100.0000 | |
| gduggal-snapfb | INDEL | D6_15 | map_l150_m1_e0 | * | 80.5600 | 72.6027 | 90.4762 | 87.9771 | 53 | 20 | 57 | 6 | 5 | 83.3333 | |
| gduggal-snapfb | INDEL | D6_15 | map_l150_m1_e0 | het | 81.6296 | 74.3590 | 90.4762 | 83.5938 | 29 | 10 | 38 | 4 | 3 | 75.0000 | |
| gduggal-snapfb | INDEL | D6_15 | map_l150_m1_e0 | hetalt | 85.7143 | 75.0000 | 100.0000 | 92.3077 | 6 | 2 | 1 | 0 | 0 | ||
| gduggal-snapfb | INDEL | D6_15 | map_l150_m1_e0 | homalt | 78.2609 | 69.2308 | 90.0000 | 92.1569 | 18 | 8 | 18 | 2 | 2 | 100.0000 | |
| gduggal-snapfb | INDEL | D6_15 | map_l150_m2_e0 | * | 82.0826 | 74.3902 | 91.5493 | 87.6522 | 61 | 21 | 65 | 6 | 5 | 83.3333 | |
| gduggal-snapfb | INDEL | D6_15 | map_l150_m2_e0 | het | 83.1533 | 76.0870 | 91.6667 | 83.2168 | 35 | 11 | 44 | 4 | 3 | 75.0000 | |
| gduggal-snapfb | INDEL | D6_15 | map_l150_m2_e0 | hetalt | 85.7143 | 75.0000 | 100.0000 | 92.8571 | 6 | 2 | 1 | 0 | 0 | ||
| gduggal-snapfb | INDEL | D6_15 | map_l150_m2_e0 | homalt | 80.0000 | 71.4286 | 90.9091 | 92.0000 | 20 | 8 | 20 | 2 | 2 | 100.0000 | |
| gduggal-snapfb | INDEL | D6_15 | map_l150_m2_e1 | * | 82.0089 | 74.1176 | 91.7808 | 87.5000 | 63 | 22 | 67 | 6 | 5 | 83.3333 | |
| gduggal-snapfb | INDEL | D6_15 | map_l150_m2_e1 | het | 83.5267 | 76.5957 | 91.8367 | 83.1034 | 36 | 11 | 45 | 4 | 3 | 75.0000 | |
| gduggal-snapfb | INDEL | D6_15 | map_l150_m2_e1 | hetalt | 80.0000 | 66.6667 | 100.0000 | 93.3333 | 6 | 3 | 1 | 0 | 0 | ||
| gduggal-snapfb | INDEL | D6_15 | map_l150_m2_e1 | homalt | 80.7692 | 72.4138 | 91.3043 | 91.7563 | 21 | 8 | 21 | 2 | 2 | 100.0000 | |
| gduggal-snapfb | INDEL | D6_15 | map_l250_m0_e0 | * | 66.6667 | 50.0000 | 100.0000 | 98.1250 | 3 | 3 | 3 | 0 | 0 | ||
| gduggal-snapfb | INDEL | D6_15 | map_l250_m0_e0 | het | 66.6667 | 50.0000 | 100.0000 | 96.4912 | 2 | 2 | 2 | 0 | 0 | ||
| gduggal-snapfb | INDEL | D6_15 | map_l250_m0_e0 | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| gduggal-snapfb | INDEL | D6_15 | map_l250_m0_e0 | homalt | 66.6667 | 50.0000 | 100.0000 | 99.0000 | 1 | 1 | 1 | 0 | 0 | ||
| gduggal-snapfb | INDEL | D6_15 | map_l250_m1_e0 | * | 62.0690 | 50.0000 | 81.8182 | 96.2199 | 9 | 9 | 9 | 2 | 2 | 100.0000 | |
| gduggal-snapfb | INDEL | D6_15 | map_l250_m1_e0 | het | 66.6667 | 54.5455 | 85.7143 | 94.4444 | 6 | 5 | 6 | 1 | 1 | 100.0000 | |
| gduggal-snapfb | INDEL | D6_15 | map_l250_m1_e0 | hetalt | 0.0000 | 100.0000 | 0 | 2 | 0 | 0 | 0 | ||||
| gduggal-snapfb | INDEL | D6_15 | map_l250_m1_e0 | homalt | 66.6667 | 60.0000 | 75.0000 | 97.4684 | 3 | 2 | 3 | 1 | 1 | 100.0000 | |
| gduggal-snapfb | INDEL | D6_15 | map_l250_m2_e0 | * | 62.8571 | 50.0000 | 84.6154 | 96.0366 | 11 | 11 | 11 | 2 | 2 | 100.0000 | |
| gduggal-snapfb | INDEL | D6_15 | map_l250_m2_e0 | het | 69.5652 | 57.1429 | 88.8889 | 93.8356 | 8 | 6 | 8 | 1 | 1 | 100.0000 | |
| gduggal-snapfb | INDEL | D6_15 | map_l250_m2_e0 | hetalt | 0.0000 | 100.0000 | 0 | 2 | 0 | 0 | 0 | ||||
| gduggal-snapfb | INDEL | D6_15 | map_l250_m2_e0 | homalt | 60.0000 | 50.0000 | 75.0000 | 97.7143 | 3 | 3 | 3 | 1 | 1 | 100.0000 | |
| gduggal-snapfb | INDEL | D6_15 | map_l250_m2_e1 | * | 62.8571 | 50.0000 | 84.6154 | 96.0961 | 11 | 11 | 11 | 2 | 2 | 100.0000 | |
| gduggal-snapfb | INDEL | D6_15 | map_l250_m2_e1 | het | 69.5652 | 57.1429 | 88.8889 | 93.9189 | 8 | 6 | 8 | 1 | 1 | 100.0000 | |