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Explore HG002 comparison results
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Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
40801-40850 / 86044 show all
gduggal-snapplatINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
gduggal-snapplatINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-snapplatINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged*
32.1716
22.5989
55.8140
74.4554
8027472576
10.5263
gduggal-snapplatINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhet
26.6350
19.2090
43.4211
75.9494
3414333430
0.0000
gduggal-snapplatINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
49.8210
34.1176
92.3077
67.9012
29562422
100.0000
gduggal-snapplatINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
27.7325
18.4783
55.5556
75.0000
177515124
33.3333
gduggal-snapplatINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged*
29.8082
20.6612
53.4884
75.0000
5019246402
5.0000
gduggal-snapplatINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
24.7191
18.0328
39.2857
73.0769
2210022340
0.0000
gduggal-snapplatINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
44.7761
28.8462
100.0000
76.3636
15371300
gduggal-snapplatINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
29.5150
19.1176
64.7059
79.0123
13551162
33.3333
gduggal-snapplatINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged*
20.2653
12.1269
61.6162
73.8786
6547161384
10.5263
gduggal-snapplatINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhet
16.2560
11.4094
28.2609
78.7037
1713213330
0.0000
gduggal-snapplatINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
22.8155
12.9477
95.9184
63.1579
473164722
100.0000
gduggal-snapplatINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhomalt
7.1429
4.1667
25.0000
86.6667
123132
66.6667
gduggal-snapplatINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
gduggal-snapplatINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
gduggal-snapplatINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
gduggal-snapplatINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
gduggal-snapplatINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged*
43.9656
31.1283
74.8222
59.1398
10872405105235457
16.1017
gduggal-snapplatINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhet
21.8945
17.7898
28.4615
75.2538
1326101112793
1.0753
gduggal-snapplatINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
51.6425
35.4076
95.3714
40.1032
89916408864333
76.7442
gduggal-snapplatINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhomalt
37.3854
26.5403
63.2184
72.2930
56155553221
65.6250
gduggal-snapplatINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged*
47.2065
34.2838
75.7645
57.3941
1022195999131753
16.7192
gduggal-snapplatINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhet
22.8209
19.0713
28.4058
74.7623
115488982473
1.2146
gduggal-snapplatINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
55.2595
38.9041
95.3409
37.9408
85213388394131
75.6098
gduggal-snapplatINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhomalt
40.3615
29.2553
65.0602
70.8772
55133542919
65.5172
gduggal-snapplatINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged*
42.7404
30.1771
73.2258
61.7378
11762721113541563
15.1807
gduggal-snapplatINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhet
23.1120
18.1529
31.7992
75.7484
1717711523263
0.9202
gduggal-snapplatINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
51.3821
35.1740
95.2929
41.6005
93017149114535
77.7778
gduggal-snapplatINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
34.7356
24.1158
62.0690
73.8149
75236724425
56.8182
gduggal-snapplatINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
37.1926
25.0079
72.5332
64.8432
15814741152957994
16.2349
gduggal-snapplatINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
22.9777
16.1847
39.5973
75.5015
31916522954506
1.3333
gduggal-snapplatINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
47.4332
31.5939
95.1220
44.9136
1114241210925643
76.7857
gduggal-snapplatINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
28.2151
17.9394
66.0465
75.3157
1486771427345
61.6438
gduggal-snapplatINDELI6_15lowcmp_SimpleRepeat_diTR_11to50*
49.9128
37.3964
75.0227
61.0403
902151082627549
17.8182
gduggal-snapplatINDELI6_15lowcmp_SimpleRepeat_diTR_11to50het
19.2946
18.8525
19.7581
78.5095
92396491995
2.5126
gduggal-snapplatINDELI6_15lowcmp_SimpleRepeat_diTR_11to50hetalt
60.1656
43.9300
95.4373
42.4088
7789937533629
80.5556
gduggal-snapplatINDELI6_15lowcmp_SimpleRepeat_diTR_11to50homalt
26.8531
20.9150
37.5000
78.8079
32121244015
37.5000
gduggal-snapplatINDELI6_15lowcmp_SimpleRepeat_diTR_51to200*
17.8218
9.7826
100.0000
82.0000
983900
gduggal-snapplatINDELI6_15lowcmp_SimpleRepeat_diTR_51to200het
0.0000
100.0000
09000
gduggal-snapplatINDELI6_15lowcmp_SimpleRepeat_diTR_51to200hetalt
19.5652
10.8434
100.0000
64.0000
974900
gduggal-snapplatINDELI6_15lowcmp_SimpleRepeat_diTR_51to200homalt
0.0000
100.0000
00000
gduggal-snapplatINDELI6_15lowcmp_SimpleRepeat_diTR_gt200*
0.0000
0.0000
0.0000
00000
gduggal-snapplatINDELI6_15lowcmp_SimpleRepeat_diTR_gt200het
0.0000
0.0000
0.0000
00000
gduggal-snapplatINDELI6_15lowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
gduggal-snapplatINDELI6_15lowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
gduggal-snapplatINDELI6_15lowcmp_SimpleRepeat_homopolymer_6to10*
27.8246
18.0645
60.5263
85.0394
2812723153
20.0000
gduggal-snapplatINDELI6_15lowcmp_SimpleRepeat_homopolymer_6to10het
27.4286
19.3548
47.0588
86.4000
1250890
0.0000
gduggal-snapplatINDELI6_15lowcmp_SimpleRepeat_homopolymer_6to10hetalt
15.6250
9.0909
55.5556
80.8511
440542
50.0000
gduggal-snapplatINDELI6_15lowcmp_SimpleRepeat_homopolymer_6to10homalt
37.8549
24.4898
83.3333
85.3659
12371021
50.0000