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Explore HG002 comparison results

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Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 782 783 784 785 786 787 788 789 790 ... 1720 1721 » 39251-39300 / 86044 show all
gduggal-snapvard	INDEL	I1_5	lowcmp_SimpleRepeat_diTR_51to200	het	49.3293	70.3704	37.9747	63.2558	19	8	30	49	32	65.3061
gduggal-snapvard	INDEL	I1_5	lowcmp_SimpleRepeat_diTR_51to200	hetalt	0.0000	8.3799	0.0000	0.0000	15	164	0	0	0
gduggal-snapvard	INDEL	I1_5	lowcmp_SimpleRepeat_diTR_51to200	homalt		0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	INDEL	I1_5	lowcmp_SimpleRepeat_diTR_gt200	*		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	INDEL	I1_5	lowcmp_SimpleRepeat_diTR_gt200	het		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	INDEL	I1_5	lowcmp_SimpleRepeat_diTR_gt200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	INDEL	I1_5	lowcmp_SimpleRepeat_diTR_gt200	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	INDEL	D1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*	59.2593	72.7273	50.0000	99.8444	8	3	2	2	2	100.0000
gduggal-snapvard	INDEL	D1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het	63.6364	87.5000	50.0000	99.8246	7	1	2	2	2	100.0000
gduggal-snapvard	INDEL	D1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	1	0	0	0
gduggal-snapvard	INDEL	D1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt		50.0000		100.0000	1	1	0	0	0
gduggal-snapvard	INDEL	D1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	80.4680	83.0514	78.0406	69.2847	53510	10920	63120	17761	15073	84.8657
gduggal-snapvard	INDEL	D1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	83.2099	96.3623	73.2167	70.3492	32026	1209	47861	17508	14830	84.7041
gduggal-snapvard	INDEL	D1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	0.0000	66.9535	0.0000	0.0000	6224	3072	0	0	0
gduggal-snapvard	INDEL	D1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	81.5781	69.6835	98.3690	63.8094	15260	6639	15259	253	243	96.0474
gduggal-snapvard	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	64.0892	66.0415	62.2490	58.2196	20741	10665	29849	18102	14698	81.1954
gduggal-snapvard	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	72.2778	90.5780	60.1295	57.9997	12459	1296	27033	17925	14535	81.0879
gduggal-snapvard	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	0.0000	60.0151	0.0000	0.0000	5576	3715	0	0	0
gduggal-snapvard	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	48.1662	32.3684	94.0862	61.2657	2706	5654	2816	177	163	92.0904
gduggal-snapvard	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	*	74.5086	80.7087	69.1932	71.0477	615	147	849	378	216	57.1429
gduggal-snapvard	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	het	76.4847	93.7931	64.5692	72.8444	408	27	667	366	206	56.2842
gduggal-snapvard	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	hetalt	0.0000	56.5217	0.0000	0.0000	39	30	0	0	0
gduggal-snapvard	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	76.8743	65.1163	93.8144	55.2995	168	90	182	12	10	83.3333
gduggal-snapvard	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	*	61.5385	80.0000	50.0000	99.8383	8	2	2	2	2	100.0000
gduggal-snapvard	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	het	66.6667	100.0000	50.0000	99.8173	7	0	2	2	2	100.0000
gduggal-snapvard	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	1	0	0	0
gduggal-snapvard	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	homalt		50.0000		100.0000	1	1	0	0	0
gduggal-snapvard	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	*	77.1166	84.3061	71.0570	69.6058	1300	242	2131	868	620	71.4286
gduggal-snapvard	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	79.0331	95.6616	67.3294	69.9860	882	40	1727	838	592	70.6444
gduggal-snapvard	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	hetalt	0.0000	58.1081	0.0000	0.0000	43	31	0	0	0
gduggal-snapvard	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	79.0433	68.6813	93.0876	67.1461	375	171	404	30	28	93.3333
gduggal-snapvard	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	79.0223	86.0771	73.0363	71.1846	915	148	1590	587	460	78.3646
gduggal-snapvard	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	het	81.2017	96.8037	69.9308	71.0611	636	21	1314	565	439	77.6991
gduggal-snapvard	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	hetalt	0.0000	54.0541	0.0000	0.0000	20	17	0	0	0
gduggal-snapvard	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	79.8588	70.1897	92.6174	71.9397	259	110	276	22	21	95.4545
gduggal-snapvard	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	*	38.8587	37.6192	40.1826	50.2147	907	1504	1584	2358	1680	71.2468
gduggal-snapvard	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	het	50.1574	67.0715	40.0560	49.5050	497	244	1573	2354	1678	71.2829
gduggal-snapvard	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	hetalt	0.0000	31.0612	0.0000	0.0000	401	890	0	0	0
gduggal-snapvard	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	4.6004	2.3747	73.3333	89.3617	9	370	11	4	2	50.0000
gduggal-snapvard	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	1	0	0	0
gduggal-snapvard	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	1	0	0	0
gduggal-snapvard	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	*	59.6473	59.7203	59.5745	39.9758	12300	8296	17724	12027	10545	87.6777
gduggal-snapvard	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	70.3688	88.2855	58.4973	39.9312	6519	865	16856	11959	10481	87.6411
gduggal-snapvard	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	0.0000	60.7906	0.0000	0.0000	4921	3174	0	0	0
gduggal-snapvard	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt	28.4562	16.8067	92.7350	41.3166	860	4257	868	68	64	94.1176
gduggal-snapvard	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	*	62.4312	62.4952	62.3673	38.8416	11411	6848	16160	9751	8900	91.2727
gduggal-snapvard	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	73.0196	90.4177	61.2365	38.8818	6039	640	15303	9687	8838	91.2357
gduggal-snapvard	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	0.0000	66.2224	0.0000	0.0000	4521	2306	0	0	0

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