PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
38201-38250 / 86044 show all
gduggal-snapvardINDELD6_15lowcmp_SimpleRepeat_diTR_11to50homalt
17.3710
9.5750
93.4911
35.2490
18717661581111
100.0000
gduggal-snapvardINDELD6_15lowcmp_SimpleRepeat_diTR_51to200*
26.7835
20.7451
37.7805
22.4371
245936303499460
92.1844
gduggal-snapvardINDELD6_15lowcmp_SimpleRepeat_diTR_51to200het
45.0912
56.0811
37.7029
22.3084
8365302499460
92.1844
gduggal-snapvardINDELD6_15lowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
18.2339
0.0000
0.0000
159713000
gduggal-snapvardINDELD6_15lowcmp_SimpleRepeat_diTR_51to200homalt
3.6585
1.8634
100.0000
66.6667
3158100
gduggal-snapvardINDELD6_15lowcmp_SimpleRepeat_diTR_gt200*
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELD6_15lowcmp_SimpleRepeat_diTR_gt200het
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELD6_15lowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELD6_15lowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELD6_15lowcmp_SimpleRepeat_homopolymer_6to10*
69.3384
66.5414
72.3810
85.5372
177891525839
67.2414
gduggal-snapvardINDELD6_15lowcmp_SimpleRepeat_homopolymer_6to10het
76.3488
85.1613
69.1892
86.1111
132231285738
66.6667
gduggal-snapvardINDELD6_15lowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
45.9459
0.0000
0.0000
1720000
gduggal-snapvardINDELD6_15lowcmp_SimpleRepeat_homopolymer_6to10homalt
54.2811
37.8378
96.0000
79.1667
28462411
100.0000
gduggal-snapvardINDELD6_15lowcmp_SimpleRepeat_homopolymer_gt10*
48.9054
43.8596
55.2632
99.4833
2532211714
82.3529
gduggal-snapvardINDELD6_15lowcmp_SimpleRepeat_homopolymer_gt10het
51.7879
47.6190
56.7568
99.4738
2022211613
81.2500
gduggal-snapvardINDELD6_15lowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
33.3333
0.0000
0.0000
36000
gduggal-snapvardINDELD6_15lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
33.3333
0.0000
99.6894
24011
100.0000
gduggal-snapvardINDELD6_15lowcmp_SimpleRepeat_quadTR_11to50*
55.4366
50.8272
60.9654
44.0200
1874181320461310988
75.4198
gduggal-snapvardINDELD6_15lowcmp_SimpleRepeat_quadTR_11to50het
66.3215
73.5347
60.3969
44.0745
121743819781297975
75.1735
gduggal-snapvardINDELD6_15lowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
47.3773
0.0000
0.0000
560622000
gduggal-snapvardINDELD6_15lowcmp_SimpleRepeat_quadTR_11to50homalt
20.0923
11.4118
83.9506
41.7266
97753681313
100.0000
gduggal-snapvardINDELD6_15lowcmp_SimpleRepeat_quadTR_51to200*
26.8403
19.6198
42.4704
32.3024
2581057251340290
85.2941
gduggal-snapvardINDELD6_15lowcmp_SimpleRepeat_quadTR_51to200het
35.5751
30.6061
42.4704
32.1470
101229251340290
85.2941
gduggal-snapvardINDELD6_15lowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
19.1677
0.0000
0.0000
152641000
gduggal-snapvardINDELD6_15lowcmp_SimpleRepeat_quadTR_51to200homalt
2.6042
100.0000
5187000
gduggal-snapvardINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELD6_15lowcmp_SimpleRepeat_triTR_11to50*
65.4441
60.5202
71.2401
29.6193
10476831080436388
88.9908
gduggal-snapvardINDELD6_15lowcmp_SimpleRepeat_triTR_11to50het
76.6125
83.7838
70.5720
29.6655
5891141024427379
88.7588
gduggal-snapvardINDELD6_15lowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
66.9521
0.0000
0.0000
391193000
gduggal-snapvardINDELD6_15lowcmp_SimpleRepeat_triTR_11to50homalt
25.7312
15.1242
86.1538
28.5714
673765699
100.0000
gduggal-snapvardINDELD6_15lowcmp_SimpleRepeat_triTR_51to200*
40.1132
30.9859
56.8627
26.6187
4498584440
90.9091
gduggal-snapvardINDELD6_15lowcmp_SimpleRepeat_triTR_51to200het
48.0929
41.6667
56.8627
26.6187
1014584440
90.9091
gduggal-snapvardINDELD6_15lowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
35.0515
0.0000
0.0000
3463000
gduggal-snapvardINDELD6_15lowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
0.0000
0.0000
021000
gduggal-snapvardINDELD6_15map_l100_m0_e0*
72.5984
69.9029
75.5102
84.8765
72311113622
61.1111
gduggal-snapvardINDELD6_15map_l100_m0_e0het
79.3681
85.0000
74.4361
85.1064
519993420
58.8235
gduggal-snapvardINDELD6_15map_l100_m0_e0hetalt
0.0000
52.6316
0.0000
0.0000
109000
gduggal-snapvardINDELD6_15map_l100_m0_e0homalt
59.7285
45.8333
85.7143
82.2785
11131222
100.0000
gduggal-snapvardINDELD6_15map_l100_m1_e0*
66.5172
61.2403
72.7891
82.3635
1581002148056
70.0000
gduggal-snapvardINDELD6_15map_l100_m1_e0het
76.3802
83.3333
70.4981
82.9300
105211847753
68.8312
gduggal-snapvardINDELD6_15map_l100_m1_e0hetalt
0.0000
38.2353
0.0000
0.0000
2642000
gduggal-snapvardINDELD6_15map_l100_m1_e0homalt
57.6307
42.1875
90.9091
76.0870
27373033
100.0000
gduggal-snapvardINDELD6_15map_l100_m2_e0*
66.9120
61.7424
73.0263
82.9213
1631012228258
70.7317
gduggal-snapvardINDELD6_15map_l100_m2_e0het
76.5318
83.2061
70.8487
83.4554
109221927955
69.6203
gduggal-snapvardINDELD6_15map_l100_m2_e0hetalt
0.0000
38.2353
0.0000
0.0000
2642000
gduggal-snapvardINDELD6_15map_l100_m2_e0homalt
58.4551
43.0769
90.9091
76.7606
28373033
100.0000
gduggal-snapvardINDELD6_15map_l100_m2_e1*
65.5947
59.6364
72.8758
83.1683
1641112238359
71.0843