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Explore HG002 comparison results

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Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 759 760 761 762 763 764 765 766 767 ... 1720 1721 » 38101-38150 / 86044 show all
gduggal-snapvard	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	*	52.0117	48.8701	55.5851	61.8274	173	181	209	167	115	68.8623
gduggal-snapvard	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	65.7441	83.6158	54.1667	62.4609	148	29	195	165	113	68.4848
gduggal-snapvard	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	hetalt	0.0000	16.4706	0.0000	0.0000	14	71	0	0	0
gduggal-snapvard	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	21.0383	11.9565	87.5000	38.4615	11	81	14	2	2	100.0000
gduggal-snapvard	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	53.8849	51.2397	56.8182	60.5970	124	118	150	114	77	67.5439
gduggal-snapvard	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	het	67.7557	87.7049	55.2000	61.5975	107	15	138	112	75	66.9643
gduggal-snapvard	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	hetalt	0.0000	15.3846	0.0000	0.0000	8	44	0	0	0
gduggal-snapvard	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	22.9299	13.2353	85.7143	26.3158	9	59	12	2	2	100.0000
gduggal-snapvard	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	*	21.6154	16.4179	31.6279	50.5178	88	448	136	294	156	53.0612
gduggal-snapvard	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	het	34.8996	38.9262	31.6279	50.4608	58	91	136	294	156	53.0612
gduggal-snapvard	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	hetalt	0.0000	8.2645	0.0000	0.0000	30	333	0	0	0
gduggal-snapvard	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt		0.0000		100.0000	0	24	0	0	0
gduggal-snapvard	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	*	42.4079	40.5785	44.4101	31.8353	1417	2075	2014	2521	2293	90.9560
gduggal-snapvard	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	52.4343	64.2857	44.2724	31.6918	477	265	2002	2520	2292	90.9524
gduggal-snapvard	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	0.0000	36.7074	0.0000	0.0000	932	1607	0	0	0
gduggal-snapvard	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt	7.2838	3.7915	92.3077	60.6061	8	203	12	1	1	100.0000
gduggal-snapvard	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	*	45.1124	44.6159	45.6200	29.5676	1330	1651	1880	2241	2138	95.4038
gduggal-snapvard	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	55.0228	69.6517	45.4722	29.4037	420	183	1868	2240	2137	95.4018
gduggal-snapvard	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	0.0000	41.1872	0.0000	0.0000	902	1288	0	0	0
gduggal-snapvard	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	8.1356	4.2553	92.3077	59.3750	8	180	12	1	1	100.0000
gduggal-snapvard	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	*	43.0132	41.0316	45.1960	37.9193	1599	2298	2225	2698	2406	89.1772
gduggal-snapvard	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	het	53.8464	67.1975	44.9213	37.7402	633	309	2198	2695	2403	89.1651
gduggal-snapvard	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	0.0000	35.7791	0.0000	0.0000	946	1698	0	0	0
gduggal-snapvard	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	12.0040	6.4309	90.0000	57.7465	20	291	27	3	3	100.0000
gduggal-snapvard	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	41.1509	37.5633	45.4962	49.7904	2374	3946	3379	4048	3339	82.4852
gduggal-snapvard	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	53.1638	65.0431	44.9536	49.5979	1282	689	3296	4036	3328	82.4579
gduggal-snapvard	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	0.0000	29.3333	0.0000	0.0000	1034	2491	0	0	0
gduggal-snapvard	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	13.0281	7.0388	87.3684	61.2245	58	766	83	12	11	91.6667
gduggal-snapvard	INDEL	I6_15	lowcmp_SimpleRepeat_diTR_11to50	*	44.3676	44.4859	44.2500	32.4739	1073	1339	1947	2453	2342	95.4749
gduggal-snapvard	INDEL	I6_15	lowcmp_SimpleRepeat_diTR_11to50	het	54.2480	71.5164	43.6969	32.3548	349	139	1903	2452	2341	95.4731
gduggal-snapvard	INDEL	I6_15	lowcmp_SimpleRepeat_diTR_11to50	hetalt	0.0000	40.2597	0.0000	0.0000	713	1058	0	0	0
gduggal-snapvard	INDEL	I6_15	lowcmp_SimpleRepeat_diTR_11to50	homalt	13.3942	7.1895	97.7778	42.3077	11	142	44	1	1	100.0000
gduggal-snapvard	INDEL	I6_15	lowcmp_SimpleRepeat_diTR_51to200	*	18.0539	11.9565	36.8421	58.6957	11	81	7	12	7	58.3333
gduggal-snapvard	INDEL	I6_15	lowcmp_SimpleRepeat_diTR_51to200	het	44.3038	55.5556	36.8421	58.6957	5	4	7	12	7	58.3333
gduggal-snapvard	INDEL	I6_15	lowcmp_SimpleRepeat_diTR_51to200	hetalt	0.0000	7.2289	0.0000	0.0000	6	77	0	0	0
gduggal-snapvard	INDEL	I6_15	lowcmp_SimpleRepeat_diTR_51to200	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	INDEL	I6_15	lowcmp_SimpleRepeat_diTR_gt200	*		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	INDEL	I6_15	lowcmp_SimpleRepeat_diTR_gt200	het		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	INDEL	I6_15	lowcmp_SimpleRepeat_diTR_gt200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	INDEL	I6_15	lowcmp_SimpleRepeat_diTR_gt200	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_6to10	*	47.5592	44.5161	51.0490	71.9424	69	86	219	210	175	83.3333
gduggal-snapvard	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_6to10	het	63.6275	87.0968	50.1217	72.1733	54	8	206	205	170	82.9268
gduggal-snapvard	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_6to10	hetalt	0.0000	15.9091	0.0000	0.0000	7	37	0	0	0
gduggal-snapvard	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	26.6325	16.3265	72.2222	65.3846	8	41	13	5	5	100.0000
gduggal-snapvard	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_gt10	*	0.0000	50.0000	0.0000	99.9466	1	1	0	1	1	100.0000
gduggal-snapvard	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_gt10	het		0.0000	0.0000	99.9462	0	0	0	1	1	100.0000

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