PrecisionFDA
Truth Challenge
Engage and improve DNA test results with our community challenges
Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
| Entry | Type | Subtype | Subset | Genotype | F-score | Recall | Precision | Frac_NA | Truth TP | Truth FN | Query TP | Query FP | FP gt | % FP ma | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
37151-37200 / 86044 show all | |||||||||||||||
| ghariani-varprowl | INDEL | D6_15 | map_l125_m2_e1 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 20 | 0 | 0 | 0 | |||
| ghariani-varprowl | INDEL | D6_15 | map_l125_m2_e1 | homalt | 87.8788 | 78.3784 | 100.0000 | 84.9741 | 29 | 8 | 29 | 0 | 0 | ||
| ghariani-varprowl | INDEL | D6_15 | map_l150_m0_e0 | * | 81.2500 | 81.2500 | 81.2500 | 95.3148 | 26 | 6 | 26 | 6 | 6 | 100.0000 | |
| ghariani-varprowl | INDEL | D6_15 | map_l150_m0_e0 | het | 86.9565 | 100.0000 | 76.9231 | 95.7096 | 20 | 0 | 20 | 6 | 6 | 100.0000 | |
| ghariani-varprowl | INDEL | D6_15 | map_l150_m0_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 5 | 0 | 0 | 0 | |||
| ghariani-varprowl | INDEL | D6_15 | map_l150_m0_e0 | homalt | 92.3077 | 85.7143 | 100.0000 | 92.2078 | 6 | 1 | 6 | 0 | 0 | ||
| ghariani-varprowl | INDEL | D6_15 | map_l150_m1_e0 | * | 81.9444 | 80.8219 | 83.0986 | 93.6036 | 59 | 14 | 59 | 12 | 11 | 91.6667 | |
| ghariani-varprowl | INDEL | D6_15 | map_l150_m1_e0 | het | 86.6667 | 100.0000 | 76.4706 | 94.7639 | 39 | 0 | 39 | 12 | 11 | 91.6667 | |
| ghariani-varprowl | INDEL | D6_15 | map_l150_m1_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 8 | 0 | 0 | 0 | |||
| ghariani-varprowl | INDEL | D6_15 | map_l150_m1_e0 | homalt | 86.9565 | 76.9231 | 100.0000 | 85.2941 | 20 | 6 | 20 | 0 | 0 | ||
| ghariani-varprowl | INDEL | D6_15 | map_l150_m2_e0 | * | 83.2298 | 81.7073 | 84.8101 | 93.6342 | 67 | 15 | 67 | 12 | 11 | 91.6667 | |
| ghariani-varprowl | INDEL | D6_15 | map_l150_m2_e0 | het | 87.3786 | 97.8261 | 78.9474 | 94.7368 | 45 | 1 | 45 | 12 | 11 | 91.6667 | |
| ghariani-varprowl | INDEL | D6_15 | map_l150_m2_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 8 | 0 | 0 | 0 | |||
| ghariani-varprowl | INDEL | D6_15 | map_l150_m2_e0 | homalt | 88.0000 | 78.5714 | 100.0000 | 86.0759 | 22 | 6 | 22 | 0 | 0 | ||
| ghariani-varprowl | INDEL | D6_15 | map_l150_m2_e1 | * | 81.4371 | 80.0000 | 82.9268 | 93.5433 | 68 | 17 | 68 | 14 | 13 | 92.8571 | |
| ghariani-varprowl | INDEL | D6_15 | map_l150_m2_e1 | het | 85.9813 | 97.8723 | 76.6667 | 94.5946 | 46 | 1 | 46 | 14 | 13 | 92.8571 | |
| ghariani-varprowl | INDEL | D6_15 | map_l150_m2_e1 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 9 | 0 | 0 | 0 | |||
| ghariani-varprowl | INDEL | D6_15 | map_l150_m2_e1 | homalt | 86.2745 | 75.8621 | 100.0000 | 86.2500 | 22 | 7 | 22 | 0 | 0 | ||
| ghariani-varprowl | INDEL | D6_15 | map_l250_m0_e0 | * | 100.0000 | 100.0000 | 100.0000 | 98.4887 | 6 | 0 | 6 | 0 | 0 | ||
| ghariani-varprowl | INDEL | D6_15 | map_l250_m0_e0 | het | 100.0000 | 100.0000 | 100.0000 | 98.8439 | 4 | 0 | 4 | 0 | 0 | ||
| ghariani-varprowl | INDEL | D6_15 | map_l250_m0_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| ghariani-varprowl | INDEL | D6_15 | map_l250_m0_e0 | homalt | 100.0000 | 100.0000 | 100.0000 | 96.0784 | 2 | 0 | 2 | 0 | 0 | ||
| ghariani-varprowl | INDEL | D6_15 | map_l250_m1_e0 | * | 88.8889 | 88.8889 | 88.8889 | 97.3174 | 16 | 2 | 16 | 2 | 1 | 50.0000 | |
| ghariani-varprowl | INDEL | D6_15 | map_l250_m1_e0 | het | 91.6667 | 100.0000 | 84.6154 | 97.7966 | 11 | 0 | 11 | 2 | 1 | 50.0000 | |
| ghariani-varprowl | INDEL | D6_15 | map_l250_m1_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 2 | 0 | 0 | 0 | |||
| ghariani-varprowl | INDEL | D6_15 | map_l250_m1_e0 | homalt | 100.0000 | 100.0000 | 100.0000 | 93.8272 | 5 | 0 | 5 | 0 | 0 | ||
| ghariani-varprowl | INDEL | D6_15 | map_l250_m2_e0 | * | 90.9091 | 90.9091 | 90.9091 | 97.1166 | 20 | 2 | 20 | 2 | 1 | 50.0000 | |
| ghariani-varprowl | INDEL | D6_15 | map_l250_m2_e0 | het | 93.3333 | 100.0000 | 87.5000 | 97.6190 | 14 | 0 | 14 | 2 | 1 | 50.0000 | |
| ghariani-varprowl | INDEL | D6_15 | map_l250_m2_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 2 | 0 | 0 | 0 | |||
| ghariani-varprowl | INDEL | D6_15 | map_l250_m2_e0 | homalt | 100.0000 | 100.0000 | 100.0000 | 93.4066 | 6 | 0 | 6 | 0 | 0 | ||
| ghariani-varprowl | INDEL | D6_15 | map_l250_m2_e1 | * | 90.9091 | 90.9091 | 90.9091 | 97.1795 | 20 | 2 | 20 | 2 | 1 | 50.0000 | |
| ghariani-varprowl | INDEL | D6_15 | map_l250_m2_e1 | het | 93.3333 | 100.0000 | 87.5000 | 97.6710 | 14 | 0 | 14 | 2 | 1 | 50.0000 | |
| ghariani-varprowl | INDEL | D6_15 | map_l250_m2_e1 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 2 | 0 | 0 | 0 | |||
| ghariani-varprowl | INDEL | D6_15 | map_l250_m2_e1 | homalt | 100.0000 | 100.0000 | 100.0000 | 93.5484 | 6 | 0 | 6 | 0 | 0 | ||
| ghariani-varprowl | INDEL | D6_15 | map_siren | * | 75.5337 | 73.4774 | 77.7083 | 86.7293 | 374 | 135 | 373 | 107 | 94 | 87.8505 | |
| ghariani-varprowl | INDEL | D6_15 | map_siren | het | 83.2073 | 98.2143 | 72.1785 | 87.9583 | 275 | 5 | 275 | 106 | 94 | 88.6792 | |
| ghariani-varprowl | INDEL | D6_15 | map_siren | hetalt | 0.0000 | 1.0101 | 0.0000 | 0.0000 | 1 | 98 | 0 | 0 | 0 | ||
| ghariani-varprowl | INDEL | D6_15 | map_siren | homalt | 85.5895 | 75.3846 | 98.9899 | 78.1457 | 98 | 32 | 98 | 1 | 0 | 0.0000 | |
| ghariani-varprowl | INDEL | D6_15 | segdup | * | 69.3267 | 66.4921 | 72.4138 | 94.6180 | 127 | 64 | 126 | 48 | 46 | 95.8333 | |
| ghariani-varprowl | INDEL | D6_15 | segdup | het | 76.9912 | 94.5652 | 64.9254 | 95.2347 | 87 | 5 | 87 | 47 | 45 | 95.7447 | |
| ghariani-varprowl | INDEL | D6_15 | segdup | hetalt | 0.0000 | 2.0408 | 0.0000 | 0.0000 | 1 | 48 | 0 | 0 | 0 | ||
| ghariani-varprowl | INDEL | D6_15 | segdup | homalt | 86.6667 | 78.0000 | 97.5000 | 90.4988 | 39 | 11 | 39 | 1 | 1 | 100.0000 | |
| ghariani-varprowl | INDEL | D6_15 | segdupwithalt | * | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| ghariani-varprowl | INDEL | D6_15 | segdupwithalt | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| ghariani-varprowl | INDEL | D6_15 | segdupwithalt | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| ghariani-varprowl | INDEL | D6_15 | segdupwithalt | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| ghariani-varprowl | INDEL | D6_15 | tech_badpromoters | * | 87.5000 | 82.3529 | 93.3333 | 55.8824 | 14 | 3 | 14 | 1 | 1 | 100.0000 | |
| ghariani-varprowl | INDEL | D6_15 | tech_badpromoters | het | 90.0000 | 90.0000 | 90.0000 | 58.3333 | 9 | 1 | 9 | 1 | 1 | 100.0000 | |
| ghariani-varprowl | INDEL | D6_15 | tech_badpromoters | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 1 | 0 | 0 | 0 | |||
| ghariani-varprowl | INDEL | D6_15 | tech_badpromoters | homalt | 90.9091 | 83.3333 | 100.0000 | 50.0000 | 5 | 1 | 5 | 0 | 0 | ||