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Explore HG002 comparison results
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Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
37001-37050 / 86044 show all
ghariani-varprowlINDELD6_15**
61.5999
58.5275
65.0128
56.9372
15271108211526582158072
98.2593
ghariani-varprowlINDELD6_15*het
73.5164
97.8175
58.8869
57.8444
113392531136479347830
98.6892
ghariani-varprowlINDELD6_15*hetalt
0.0000
0.3915
0.0000
0.0000
328142000
ghariani-varprowlINDELD6_15*homalt
74.2367
61.6503
93.2807
52.1893
390024263901281242
86.1210
ghariani-varprowlINDELD6_15HG002complexvar*
76.3894
73.9155
79.0345
58.8274
3919138339131038969
93.3526
ghariani-varprowlINDELD6_15HG002complexvarhet
84.7743
95.1923
76.4117
58.8552
29701502977919877
95.4298
ghariani-varprowlINDELD6_15HG002complexvarhetalt
0.0000
1.6782
0.0000
0.0000
17996000
ghariani-varprowlINDELD6_15HG002complexvarhomalt
83.9832
79.7263
88.7204
58.7246
93223793611992
77.3109
ghariani-varprowlINDELD6_15HG002compoundhet*
10.6907
9.2349
12.6916
39.6150
834819782856965632
98.8764
ghariani-varprowlINDELD6_15HG002compoundhethet
22.6701
91.4720
12.9384
39.2155
7837380854375400
99.3195
ghariani-varprowlINDELD6_15HG002compoundhethetalt
0.0000
0.3926
0.0000
0.0000
328119000
ghariani-varprowlINDELD6_15HG002compoundhethomalt
13.1465
79.1667
7.1685
47.3585
19520259232
89.5753
ghariani-varprowlINDELD6_15decoy*
0.0000
0.0000
99.9531
01011
100.0000
ghariani-varprowlINDELD6_15decoyhet
0.0000
0.0000
99.9494
00011
100.0000
ghariani-varprowlINDELD6_15decoyhetalt
0.0000
0.0000
0.0000
01000
ghariani-varprowlINDELD6_15decoyhomalt
0.0000
100.0000
00000
ghariani-varprowlINDELD6_15func_cds*
86.7470
83.7209
90.0000
58.3333
3673644
100.0000
ghariani-varprowlINDELD6_15func_cdshet
91.8033
96.5517
87.5000
57.8947
2812844
100.0000
ghariani-varprowlINDELD6_15func_cdshetalt
0.0000
0.0000
0.0000
02000
ghariani-varprowlINDELD6_15func_cdshomalt
80.0000
66.6667
100.0000
60.0000
84800
ghariani-varprowlINDELD6_15lowcmp_AllRepeats_51to200bp_gt95identity_merged*
26.8074
23.6447
30.9468
56.6057
929300092520642051
99.3702
ghariani-varprowlINDELD6_15lowcmp_AllRepeats_51to200bp_gt95identity_mergedhet
44.3050
88.6576
29.5314
54.8186
85210985720452032
99.3643
ghariani-varprowlINDELD6_15lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.2959
0.0000
0.0000
72359000
ghariani-varprowlINDELD6_15lowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
20.2441
11.6279
78.1609
81.2903
70532681919
100.0000
ghariani-varprowlINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_merged*
50.0000
50.0000
50.0000
97.9522
33332
66.6667
ghariani-varprowlINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
66.6667
100.0000
50.0000
97.5904
30332
66.6667
ghariani-varprowlINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
02000
ghariani-varprowlINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
01000
ghariani-varprowlINDELD6_15lowcmp_AllRepeats_lt51bp_gt95identity_merged*
46.6247
43.6219
50.0715
62.1939
70009047700369836898
98.7828
ghariani-varprowlINDELD6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
61.3598
97.0699
44.8576
61.9828
5433164546567186663
99.1813
ghariani-varprowlINDELD6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
0.4257
0.0000
0.0000
296783000
ghariani-varprowlINDELD6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
56.5337
42.2760
85.3023
63.5610
153821001538265235
88.6792
ghariani-varprowlINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331*
42.9887
39.8223
46.7021
60.4305
703710634703180247936
98.9033
ghariani-varprowlINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331het
58.4037
95.8604
41.9946
60.0631
5604242563477827720
99.2033
ghariani-varprowlINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
0.0000
0.3971
0.0000
0.0000
328027000
ghariani-varprowlINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331homalt
51.7959
37.2013
85.2349
63.2016
140123651397242216
89.2562
ghariani-varprowlINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged*
70.4495
67.4641
73.7113
75.8706
141681435150
98.0392
ghariani-varprowlINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhet
82.0991
93.7008
73.0539
75.4412
11981224544
97.7778
ghariani-varprowlINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
039000
ghariani-varprowlINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
61.7234
51.1628
77.7778
78.2258
22212166
100.0000
ghariani-varprowlINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
50.0000
50.0000
50.0000
98.5348
22221
50.0000
ghariani-varprowlINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
66.6667
100.0000
50.0000
98.2684
20221
50.0000
ghariani-varprowlINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
02000
ghariani-varprowlINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ghariani-varprowlINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged*
85.8567
85.0746
86.6532
64.3732
855150857132126
95.4545
ghariani-varprowlINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhet
89.5152
98.0903
82.3188
67.4835
56511568122117
95.9016
ghariani-varprowlINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
0.0000
1.8182
0.0000
0.0000
154000
ghariani-varprowlINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
85.8841
77.2727
96.6555
54.2813
28985289109
90.0000
ghariani-varprowlINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged*
88.0745
87.7173
88.4346
62.4232
7571067579993
93.9394
ghariani-varprowlINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
90.6015
98.9733
83.5355
66.2376
48254829590
94.7368