PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
3401-3450 / 86044 show all
raldana-dualsentieonSNPtvmap_l150_m2_e1*
99.0225
99.0871
98.9579
75.9025
11397105113951203
2.5000
raldana-dualsentieonSNPtvmap_l150_m2_e1het
98.6349
98.8432
98.4275
78.2306
72638572611161
0.8621
raldana-dualsentieonSNPtvmap_l150_m2_e1hetalt
94.7368
90.0000
100.0000
77.5000
1821800
raldana-dualsentieonSNPtvmap_l150_m2_e1homalt
99.7335
99.5646
99.9029
70.1838
411618411642
50.0000
raldana-dualsentieonSNPtvmap_l250_m0_e0*
97.1091
96.6013
97.6222
91.9886
73926739182
11.1111
raldana-dualsentieonSNPtvmap_l250_m0_e0het
96.7458
96.1538
97.3451
92.1972
55022550151
6.6667
raldana-dualsentieonSNPtvmap_l250_m0_e0hetalt
0.0000
100.0000
00000
raldana-dualsentieonSNPtvmap_l250_m0_e0homalt
98.1818
97.9275
98.4375
91.2528
189418931
33.3333
raldana-dualsentieonSNPtvmap_l250_m1_e0*
98.0065
97.5066
98.5115
87.3534
2581662581393
7.6923
raldana-dualsentieonSNPtvmap_l250_m1_e0het
97.2943
96.5865
98.0125
88.5090
1726611726351
2.8571
raldana-dualsentieonSNPtvmap_l250_m1_e0hetalt
100.0000
100.0000
100.0000
88.8889
40400
raldana-dualsentieonSNPtvmap_l250_m1_e0homalt
99.4740
99.4159
99.5322
84.0366
851585142
50.0000
raldana-dualsentieonSNPtvmap_l250_m2_e0*
98.1178
97.6752
98.5644
88.1773
2815672815413
7.3171
raldana-dualsentieonSNPtvmap_l250_m2_e0het
97.4585
96.8557
98.0689
89.2184
1879611879371
2.7027
raldana-dualsentieonSNPtvmap_l250_m2_e0hetalt
100.0000
100.0000
100.0000
87.8049
50500
raldana-dualsentieonSNPtvmap_l250_m2_e0homalt
99.4658
99.3597
99.5722
85.2640
931693142
50.0000
raldana-dualsentieonSNPtvmap_l250_m2_e1*
98.1230
97.7023
98.5472
88.2575
2849672849423
7.1429
raldana-dualsentieonSNPtvmap_l250_m2_e1het
97.4661
96.8957
98.0433
89.2902
1904611904381
2.6316
raldana-dualsentieonSNPtvmap_l250_m2_e1hetalt
100.0000
100.0000
100.0000
88.0952
50500
raldana-dualsentieonSNPtvmap_l250_m2_e1homalt
99.4709
99.3658
99.5763
85.3530
940694042
50.0000
raldana-dualsentieonSNPtvmap_siren*
99.5658
99.6081
99.5235
57.2670
45750180457422198
3.6530
raldana-dualsentieonSNPtvmap_sirenhet
99.3697
99.4827
99.2570
59.7589
28461148284562132
0.9390
raldana-dualsentieonSNPtvmap_sirenhetalt
97.5000
96.2963
98.7342
67.0833
7837811
100.0000
raldana-dualsentieonSNPtvmap_sirenhomalt
99.9013
99.8318
99.9710
52.2802
17211291720855
100.0000
raldana-dualsentieonSNPtvsegdup*
99.5671
99.7656
99.3693
91.0002
8512208508546
11.1111
raldana-dualsentieonSNPtvsegduphet
99.3773
99.6595
99.0966
91.7904
5269185265480
0.0000
raldana-dualsentieonINDEL***
99.1095
98.7566
99.4648
57.7282
340258428434012018301626
88.8525
raldana-dualsentieonINDEL**het
99.3035
99.0228
99.5858
57.9096
1922361897191867798611
76.5664
raldana-dualsentieonINDEL**hetalt
95.3681
91.1677
99.9742
56.5406
2300822292323066
100.0000
raldana-dualsentieonINDEL**homalt
99.5287
99.8738
99.1860
57.6626
12501415812502310261009
98.3431
raldana-dualsentieonINDEL*HG002complexvar*
98.9594
98.2323
99.6974
57.2556
75578136075441229196
85.5895
raldana-dualsentieonINDEL*HG002complexvarhet
98.7829
97.8101
99.7752
56.2974
4520010124483110172
71.2871
raldana-dualsentieonINDEL*HG002complexvarhetalt
95.3862
91.2949
99.8613
67.7087
3377322360055
100.0000
raldana-dualsentieonINDEL*HG002complexvarhomalt
99.7249
99.9038
99.5467
56.9673
270012627010123119
96.7480
raldana-dualsentieonINDEL*HG002compoundhet*
92.3506
90.1368
94.6759
61.0439
2700529552688715121502
99.3386
raldana-dualsentieonINDEL*HG002compoundhethet
83.9323
82.2912
85.6402
78.9688
33697253137526520
98.8593
raldana-dualsentieonINDEL*HG002compoundhethetalt
95.3715
91.1597
99.9913
50.4712
2295422262306822
100.0000
raldana-dualsentieonINDEL*HG002compoundhethomalt
57.9932
99.4169
40.9364
81.2893
6824682984980
99.5935
raldana-dualsentieonINDEL*decoy*
100.0000
100.0000
100.0000
99.9200
1001000
raldana-dualsentieonINDEL*decoyhet
100.0000
100.0000
100.0000
99.9259
60600
raldana-dualsentieonINDEL*decoyhetalt
100.0000
100.0000
100.0000
99.8020
10100
raldana-dualsentieonINDEL*decoyhomalt
100.0000
100.0000
100.0000
99.9232
30300
raldana-dualsentieonINDEL*func_cds*
99.2118
98.8764
99.5495
41.6557
440544220
0.0000
raldana-dualsentieonINDEL*func_cdshet
98.5959
98.1308
99.0654
45.9596
210421220
0.0000
raldana-dualsentieonINDEL*func_cdshetalt
88.8889
80.0000
100.0000
60.0000
41400
raldana-dualsentieonINDEL*func_cdshomalt
100.0000
100.0000
100.0000
36.3380
226022600
raldana-dualsentieonINDEL*lowcmp_AllRepeats_51to200bp_gt95identity_merged*
93.2233
91.0156
95.5407
66.1212
91689059020421396
94.0618
raldana-dualsentieonINDEL*lowcmp_AllRepeats_51to200bp_gt95identity_mergedhet
93.1260
92.3762
93.8881
76.4157
37323083441224202
90.1786
raldana-dualsentieonINDEL*lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
91.8485
84.9895
99.9117
39.0086
3250574339333
100.0000
raldana-dualsentieonINDEL*lowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
95.2713
98.9588
91.8487
64.7877
2186232186194191
98.4536