PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
32051-32100 / 86044 show all
hfeng-pmm2INDELC1_5lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELC1_5lowcmp_SimpleRepeat_quadTR_11to50*
0.0000
0.0000
0.0000
01000
hfeng-pmm2INDELC1_5lowcmp_SimpleRepeat_quadTR_11to50het
0.0000
0.0000
0.0000
01000
hfeng-pmm2INDELC1_5lowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELC1_5lowcmp_SimpleRepeat_quadTR_11to50homalt
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELC1_5lowcmp_SimpleRepeat_quadTR_51to200*
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELC1_5lowcmp_SimpleRepeat_quadTR_51to200het
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELC1_5lowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELC1_5lowcmp_SimpleRepeat_quadTR_51to200homalt
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELC1_5lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELC1_5lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELC1_5lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELC1_5lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELC1_5lowcmp_SimpleRepeat_triTR_11to50*
0.0000
100.0000
0.0000
0.0000
10000
hfeng-pmm2INDELC1_5lowcmp_SimpleRepeat_triTR_11to50het
0.0000
100.0000
0.0000
0.0000
10000
hfeng-pmm2INDELC1_5lowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELC1_5lowcmp_SimpleRepeat_triTR_11to50homalt
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELC1_5lowcmp_SimpleRepeat_triTR_51to200*
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELC1_5lowcmp_SimpleRepeat_triTR_51to200het
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELC1_5lowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELC1_5lowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELC1_5map_l100_m0_e0*
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELC1_5map_l100_m0_e0het
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELC1_5map_l100_m0_e0hetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELC1_5map_l100_m0_e0homalt
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELC1_5map_l100_m1_e0*
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELC1_5map_l100_m1_e0het
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELC1_5map_l100_m1_e0hetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELC1_5map_l100_m1_e0homalt
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELC1_5map_l100_m2_e0*
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
hfeng-pmm2INDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
hfeng-pmm2INDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
hfeng-pmm2INDELI16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_merged*
96.9792
95.6179
98.3798
79.2724
10915010931812
66.6667
hfeng-pmm2INDELI16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
97.5416
96.5596
98.5437
84.5866
4211540660
0.0000
hfeng-pmm2INDELI16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
96.7395
93.9966
99.6473
67.3951
5483556522
100.0000
hfeng-pmm2INDELI16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
96.0630
100.0000
92.4242
86.0759
12201221010
100.0000
hfeng-pmm2INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331*
96.9762
95.3595
98.6486
84.3187
14597114602010
50.0000
hfeng-pmm2INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331het
97.1574
95.4955
98.8782
87.2783
6363061770
0.0000
hfeng-pmm2INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
96.8846
94.2337
99.6890
71.2433
6213864122
100.0000
hfeng-pmm2INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331homalt
96.6507
98.5366
94.8357
90.7270
2023202118
72.7273
hfeng-pmm2INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged*
96.7442
96.2963
97.1963
88.8889
104410430
0.0000
hfeng-pmm2INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhet
96.1351
95.4545
96.8254
88.2463
6336120
0.0000
hfeng-pmm2INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
84.6154
1802000
hfeng-pmm2INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
95.8333
95.8333
95.8333
91.9192
2312310
0.0000
hfeng-pmm2INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
hfeng-pmm2INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
hfeng-pmm2INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
hfeng-pmm2INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
hfeng-pmm2INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged*
99.1501
98.3146
100.0000
80.6416
175317500