PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
2851-2900 / 86044 show all
raldana-dualsentieonSNPtilowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
raldana-dualsentieonSNPtilowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
raldana-dualsentieonSNPtilowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
raldana-dualsentieonSNPtilowcmp_AllRepeats_lt51bp_gt95identity_merged*
99.3694
98.9198
99.8231
52.8249
2765730227656499
18.3673
raldana-dualsentieonSNPtilowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
99.0352
98.3306
99.7499
54.7881
1755329817552444
9.0909
raldana-dualsentieonSNPtilowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
90.9091
83.3333
100.0000
86.8421
51500
raldana-dualsentieonSNPtilowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
99.9604
99.9703
99.9505
48.8948
1009931009955
100.0000
raldana-dualsentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331*
99.0544
98.5583
99.5556
65.3417
30694449306941379
6.5693
raldana-dualsentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331het
98.5826
97.8702
99.3056
66.7018
19162417191621346
4.4776
raldana-dualsentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
100.0000
100.0000
100.0000
81.2500
1201200
raldana-dualsentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331homalt
99.8483
99.7230
99.9740
62.7618
11520321152033
100.0000
raldana-dualsentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged*
99.3054
99.0537
99.5584
45.3803
2931282931130
0.0000
raldana-dualsentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhet
98.9589
98.6346
99.2853
46.9834
1806251806130
0.0000
raldana-dualsentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
raldana-dualsentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
99.8668
99.7340
100.0000
42.5727
11253112500
raldana-dualsentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
raldana-dualsentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
raldana-dualsentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
raldana-dualsentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
raldana-dualsentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged*
99.6003
99.4016
99.7997
45.8452
398724398780
0.0000
raldana-dualsentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhet
99.3889
99.0959
99.6837
47.2135
252123252180
0.0000
raldana-dualsentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
50.0000
10100
raldana-dualsentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
99.9659
99.9318
100.0000
43.3050
14651146500
raldana-dualsentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged*
99.6302
99.4260
99.8353
48.5599
242514242540
0.0000
raldana-dualsentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
99.4286
99.1139
99.7452
49.4364
156614156640
0.0000
raldana-dualsentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
50.0000
10100
raldana-dualsentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
46.8731
858085800
raldana-dualsentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged*
92.7536
86.8778
99.4819
90.7523
1922919210
0.0000
raldana-dualsentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhet
90.3226
82.8947
99.2126
91.1560
1262612610
0.0000
raldana-dualsentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
raldana-dualsentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhomalt
97.7778
95.6522
100.0000
89.8305
6636600
raldana-dualsentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
raldana-dualsentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
raldana-dualsentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
raldana-dualsentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
raldana-dualsentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged*
93.8925
88.9660
99.3966
87.1383
1153143115374
57.1429
raldana-dualsentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhet
90.8280
83.7838
99.1655
88.4275
71313871363
50.0000
raldana-dualsentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
94.1176
10100
raldana-dualsentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhomalt
99.3213
98.8739
99.7727
84.2237
439543911
100.0000
raldana-dualsentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged*
93.9322
89.0399
99.3933
86.4223
98312198364
66.6667
raldana-dualsentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhet
90.6486
83.4722
99.1749
87.8994
60111960153
60.0000
raldana-dualsentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
93.3333
10100
raldana-dualsentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhomalt
99.6078
99.4778
99.7382
83.1048
381238111
100.0000
raldana-dualsentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged*
98.3801
97.1609
99.6303
75.8203
64681896468244
16.6667
raldana-dualsentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhet
97.5475
95.7291
99.4363
77.3949
40571814057233
13.0435
raldana-dualsentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
91.6667
20200
raldana-dualsentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
99.8135
99.6690
99.9585
72.5387
24098240911
100.0000
raldana-dualsentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
99.0544
98.5583
99.5556
65.3417
30694449306941379
6.5693
raldana-dualsentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
98.5826
97.8702
99.3056
66.7018
19162417191621346
4.4776
raldana-dualsentieonSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
100.0000
100.0000
100.0000
81.2500
1201200