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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 501 502 503 504 505 506 507 508 509 ... 1720 1721 » 25201-25250 / 86044 show all
jlack-gatk	INDEL	D1_5	map_l250_m2_e0	het	86.2319	98.3471	76.7742	96.9560	119	2	119	36	1	2.7778
jlack-gatk	INDEL	D1_5	map_l250_m2_e0	hetalt	100.0000	100.0000	100.0000	98.1132	3	0	3	0	0
jlack-gatk	INDEL	D1_5	map_l250_m2_e0	homalt	99.1597	98.3333	100.0000	94.2774	59	1	59	0	0
jlack-gatk	INDEL	D1_5	map_l250_m2_e1	*	90.3226	98.3784	83.4862	96.6186	182	3	182	36	1	2.7778
jlack-gatk	INDEL	D1_5	map_l250_m2_e1	het	86.3309	98.3607	76.9231	97.0115	120	2	120	36	1	2.7778
jlack-gatk	INDEL	D1_5	map_l250_m2_e1	hetalt	100.0000	100.0000	100.0000	98.1707	3	0	3	0	0
jlack-gatk	INDEL	D1_5	map_l250_m2_e1	homalt	99.1597	98.3333	100.0000	94.4497	59	1	59	0	0
jlack-gatk	INDEL	D1_5	map_siren	*	96.8891	99.0932	94.7810	83.4660	3497	32	3505	193	13	6.7358
jlack-gatk	INDEL	D1_5	map_siren	het	95.7195	99.4730	92.2389	84.5589	2265	12	2270	191	11	5.7592
jlack-gatk	INDEL	D1_5	map_siren	hetalt	95.0000	90.4762	100.0000	90.7543	76	8	76	0	0
jlack-gatk	INDEL	D1_5	map_siren	homalt	99.3983	98.9726	99.8277	79.2900	1156	12	1159	2	2	100.0000
jlack-gatk	INDEL	D1_5	segdup	*	95.5828	98.9121	92.4704	95.7903	1091	12	1093	89	5	5.6180
jlack-gatk	INDEL	D1_5	segdup	het	93.5227	98.8439	88.7451	96.2758	684	8	686	87	3	3.4483
jlack-gatk	INDEL	D1_5	segdup	hetalt	97.0297	94.2308	100.0000	95.7018	49	3	49	0	0
jlack-gatk	INDEL	D1_5	segdup	homalt	99.5828	99.7214	99.4444	94.1766	358	1	358	2	2	100.0000
jlack-gatk	INDEL	D1_5	segdupwithalt	*	100.0000	100.0000	100.0000	99.9959	1	0	1	0	0
jlack-gatk	INDEL	D1_5	segdupwithalt	het	100.0000	100.0000	100.0000	99.9946	1	0	1	0	0
jlack-gatk	INDEL	D1_5	segdupwithalt	hetalt		0.0000		100.0000	0	0	0	0	0
jlack-gatk	INDEL	D1_5	segdupwithalt	homalt		0.0000		100.0000	0	0	0	0	0
jlack-gatk	INDEL	D1_5	tech_badpromoters	*	95.0000	100.0000	90.4762	48.7805	19	0	19	2	0	0.0000
jlack-gatk	INDEL	D1_5	tech_badpromoters	het	88.8889	100.0000	80.0000	56.5217	8	0	8	2	0	0.0000
jlack-gatk	INDEL	D1_5	tech_badpromoters	hetalt	100.0000	100.0000	100.0000	0.0000	2	0	2	0	0
jlack-gatk	INDEL	D1_5	tech_badpromoters	homalt	100.0000	100.0000	100.0000	43.7500	9	0	9	0	0
jlack-gatk	INDEL	D6_15	*	*	96.4774	96.4127	96.5422	54.8116	25156	936	25156	901	581	64.4839
jlack-gatk	INDEL	D6_15	*	het	96.7124	98.9476	94.5760	63.3561	11470	122	11421	655	345	52.6718
jlack-gatk	INDEL	D6_15	*	hetalt	94.6900	90.3964	99.4119	33.6937	7389	785	7438	44	37	84.0909
jlack-gatk	INDEL	D6_15	*	homalt	98.1988	99.5416	96.8918	51.5867	6297	29	6297	202	199	98.5149
jlack-gatk	INDEL	D6_15	HG002complexvar	*	97.2520	96.7937	97.7147	58.0825	5132	170	5131	120	96	80.0000
jlack-gatk	INDEL	D6_15	HG002complexvar	het	98.1096	98.1090	98.1101	59.2917	3061	59	3011	58	40	68.9655
jlack-gatk	INDEL	D6_15	HG002complexvar	hetalt	92.4487	89.3386	95.7831	48.0438	905	108	954	42	37	88.0952
jlack-gatk	INDEL	D6_15	HG002complexvar	homalt	99.0234	99.7434	98.3137	61.3807	1166	3	1166	20	19	95.0000
jlack-gatk	INDEL	D6_15	HG002compoundhet	*	92.1390	91.0641	93.2396	35.4470	8224	807	8220	596	552	92.6174
jlack-gatk	INDEL	D6_15	HG002compoundhet	het	80.7008	96.6121	69.2893	65.6695	827	29	819	363	325	89.5317
jlack-gatk	INDEL	D6_15	HG002compoundhet	hetalt	94.7748	90.4552	99.5278	24.3596	7373	778	7377	35	30	85.7143
jlack-gatk	INDEL	D6_15	HG002compoundhet	homalt	19.5122	100.0000	10.8108	46.5060	24	0	24	198	197	99.4949
jlack-gatk	INDEL	D6_15	decoy	*	66.6667	100.0000	50.0000	99.9115	1	0	1	1	0	0.0000
jlack-gatk	INDEL	D6_15	decoy	het		0.0000	0.0000	99.9476	0	0	0	1	0	0.0000
jlack-gatk	INDEL	D6_15	decoy	hetalt	100.0000	100.0000	100.0000	99.1736	1	0	1	0	0
jlack-gatk	INDEL	D6_15	decoy	homalt		0.0000		100.0000	0	0	0	0	0
jlack-gatk	INDEL	D6_15	func_cds	*	100.0000	100.0000	100.0000	57.8431	43	0	43	0	0
jlack-gatk	INDEL	D6_15	func_cds	het	100.0000	100.0000	100.0000	57.3529	29	0	29	0	0
jlack-gatk	INDEL	D6_15	func_cds	hetalt	100.0000	100.0000	100.0000	60.0000	2	0	2	0	0
jlack-gatk	INDEL	D6_15	func_cds	homalt	100.0000	100.0000	100.0000	58.6207	12	0	12	0	0
jlack-gatk	INDEL	D6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	89.2273	86.8923	91.6913	54.4965	3414	515	3410	309	298	96.4401
jlack-gatk	INDEL	D6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	88.8240	95.3174	83.1589	72.8494	916	45	874	177	168	94.9153
jlack-gatk	INDEL	D6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	89.0334	80.6002	99.4376	31.3443	1907	459	1945	11	10	90.9091
jlack-gatk	INDEL	D6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	89.9543	98.1728	83.0056	50.9979	591	11	591	121	120	99.1736
jlack-gatk	INDEL	D6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*	100.0000	100.0000	100.0000	97.0588	6	0	6	0	0
jlack-gatk	INDEL	D6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het	100.0000	100.0000	100.0000	97.8417	3	0	3	0	0
jlack-gatk	INDEL	D6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	90.0000	2	0	2	0	0

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