PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
23201-23250 / 86044 show all
jli-customSNPtilowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
jli-customSNPtilowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000
jli-customSNPtilowcmp_SimpleRepeat_triTR_11to50*
99.8465
99.8976
99.7954
28.9038
39024390381
12.5000
jli-customSNPtilowcmp_SimpleRepeat_triTR_11to50het
99.7984
99.8789
99.7181
29.8389
24753247670
0.0000
jli-customSNPtilowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
100.0000
01000
jli-customSNPtilowcmp_SimpleRepeat_triTR_11to50homalt
99.9650
100.0000
99.9300
27.1057
14270142711
100.0000
jli-customSNPtilowcmp_SimpleRepeat_triTR_51to200*
100.0000
100.0000
100.0000
93.2203
80800
jli-customSNPtilowcmp_SimpleRepeat_triTR_51to200het
100.0000
100.0000
100.0000
92.0000
60600
jli-customSNPtilowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
00000
jli-customSNPtilowcmp_SimpleRepeat_triTR_51to200homalt
100.0000
100.0000
100.0000
95.3488
20200
jli-customSNPtimap_l100_m0_e0*
99.2096
98.8792
99.5422
63.1044
21527244215279935
35.3535
jli-customSNPtimap_l100_m0_e0het
98.9518
98.5697
99.3369
65.4782
13783200137839228
30.4348
jli-customSNPtimap_l100_m0_e0hetalt
96.5517
100.0000
93.3333
66.6667
1401411
100.0000
jli-customSNPtimap_l100_m0_e0homalt
99.6776
99.4340
99.9224
57.9039
773044773066
100.0000
jli-customSNPtimap_l100_m1_e0*
99.4974
99.3240
99.6713
60.4603
476073244760515750
31.8471
jli-customSNPtimap_l100_m1_e0het
99.3190
99.1250
99.5138
62.5391
296802622967814538
26.2069
jli-customSNPtimap_l100_m1_e0hetalt
98.3051
100.0000
96.6667
70.5882
2902911
100.0000
jli-customSNPtimap_l100_m1_e0homalt
99.7965
99.6548
99.9386
56.4067
1789862178981111
100.0000
jli-customSNPtimap_l100_m2_e0*
99.4978
99.3362
99.6598
62.5143
486363254863416650
30.1205
jli-customSNPtimap_l100_m2_e0het
99.3179
99.1411
99.4953
64.3096
303592633035715438
24.6753
jli-customSNPtimap_l100_m2_e0hetalt
98.3607
100.0000
96.7742
72.8070
3003011
100.0000
jli-customSNPtimap_l100_m2_e0homalt
99.8004
99.6614
99.9398
59.0453
1824762182471111
100.0000
jli-customSNPtimap_l100_m2_e1*
99.5011
99.3412
99.6614
62.5257
491593264915716750
29.9401
jli-customSNPtimap_l100_m2_e1het
99.3237
99.1505
99.4976
64.3340
306972633069515538
24.5161
jli-customSNPtimap_l100_m2_e1hetalt
98.4127
100.0000
96.8750
72.1739
3103111
100.0000
jli-customSNPtimap_l100_m2_e1homalt
99.7997
99.6593
99.9404
59.0260
1843163184311111
100.0000
jli-customSNPtimap_l125_m0_e0*
98.9692
98.5504
99.3915
69.4510
12577185125777730
38.9610
jli-customSNPtimap_l125_m0_e0het
98.6256
98.1363
99.1199
71.4709
810915481097225
34.7222
jli-customSNPtimap_l125_m0_e0hetalt
100.0000
100.0000
100.0000
73.3333
80800
jli-customSNPtimap_l125_m0_e0homalt
99.5980
99.3097
99.8880
64.8868
446031446055
100.0000
jli-customSNPtimap_l125_m1_e0*
99.3574
99.1001
99.6162
66.6526
290712642906911241
36.6071
jli-customSNPtimap_l125_m1_e0het
99.1158
98.8065
99.4270
68.8246
180482181804610433
31.7308
jli-customSNPtimap_l125_m1_e0hetalt
100.0000
100.0000
100.0000
67.5676
2402400
jli-customSNPtimap_l125_m1_e0homalt
99.7551
99.5835
99.9273
62.3216
10999461099988
100.0000
jli-customSNPtimap_l125_m2_e0*
99.3639
99.1176
99.6114
68.7298
299912672998911741
35.0427
jli-customSNPtimap_l125_m2_e0het
99.1286
98.8398
99.4191
70.5575
186572191865510933
30.2752
jli-customSNPtimap_l125_m2_e0hetalt
100.0000
100.0000
100.0000
73.6264
2402400
jli-customSNPtimap_l125_m2_e0homalt
99.7530
99.5774
99.9293
65.1271
11310481131088
100.0000
jli-customSNPtimap_l125_m2_e1*
99.3704
99.1266
99.6153
68.7864
303022673030011741
35.0427
jli-customSNPtimap_l125_m2_e1het
99.1383
98.8526
99.4256
70.6228
188682191886610933
30.2752
jli-customSNPtimap_l125_m2_e1hetalt
100.0000
100.0000
100.0000
73.6264
2402400
jli-customSNPtimap_l125_m2_e1homalt
99.7552
99.5811
99.9299
65.1529
11410481141088
100.0000
jli-customSNPtimap_l150_m0_e0*
98.8029
98.1682
99.4459
75.0426
771714477174319
44.1860
jli-customSNPtimap_l150_m0_e0het
98.3675
97.5280
99.2216
76.7991
497112649713915
38.4615
jli-customSNPtimap_l150_m0_e0hetalt
100.0000
100.0000
100.0000
86.3636
30300
jli-customSNPtimap_l150_m0_e0homalt
99.6006
99.3481
99.8544
71.0140
274318274344
100.0000
jli-customSNPtimap_l150_m1_e0*
99.2008
98.8636
99.5403
71.1664
19488224194869035
38.8889
jli-customSNPtimap_l150_m1_e0het
98.8959
98.4802
99.3151
73.0550
12182188121808429
34.5238
jli-customSNPtimap_l150_m1_e0hetalt
100.0000
100.0000
100.0000
73.6842
1501500
jli-customSNPtimap_l150_m1_e0homalt
99.7128
99.5087
99.9178
67.3088
729136729166
100.0000