PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
12001-12050 / 86044 show all
mlin-fermikitINDEL*segdupwithalt*
100.0000
100.0000
100.0000
99.9959
10100
mlin-fermikitINDEL*segdupwithalthet
100.0000
100.0000
100.0000
99.9929
10100
mlin-fermikitINDEL*segdupwithalthetalt
0.0000
100.0000
00000
mlin-fermikitINDEL*segdupwithalthomalt
0.0000
100.0000
00000
mlin-fermikitINDEL*tech_badpromoters*
94.6667
93.4211
95.9459
50.0000
7157133
100.0000
mlin-fermikitINDEL*tech_badpromotershet
93.3333
89.7436
97.2222
44.6154
3543511
100.0000
mlin-fermikitINDEL*tech_badpromotershetalt
85.7143
75.0000
100.0000
50.0000
31300
mlin-fermikitINDEL*tech_badpromotershomalt
97.0588
100.0000
94.2857
54.5455
3303322
100.0000
mlin-fermikitINDELC16_PLUS**
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUS*het
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUS*hetalt
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUS*homalt
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSHG002complexvar*
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSHG002complexvarhet
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSHG002complexvarhetalt
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSHG002complexvarhomalt
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSHG002compoundhet*
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSHG002compoundhethet
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSHG002compoundhethetalt
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSHG002compoundhethomalt
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSdecoy*
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSdecoyhet
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSdecoyhetalt
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSdecoyhomalt
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSfunc_cds*
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSfunc_cdshet
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSfunc_cdshetalt
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSfunc_cdshomalt
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331*
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331het
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331homalt
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000