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Explore HG002 comparison results
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Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
11301-11350 / 86044 show all
mlin-fermikitINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhomalt
91.9346
96.5800
87.7156
44.0577
49421754934691677
97.9740
mlin-fermikitINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged*
86.9120
84.3420
89.6435
36.7917
1540028591539017781740
97.8628
mlin-fermikitINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhet
88.0705
92.7235
83.8622
38.1946
6193486618411901162
97.6471
mlin-fermikitINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
80.4581
67.4235
99.7403
24.8984
4603222446091212
100.0000
mlin-fermikitINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhomalt
92.6929
96.8651
88.8653
43.0098
46041494597576566
98.2639
mlin-fermikitINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged*
85.8694
82.8315
89.1386
45.6102
1843038201840022422180
97.2346
mlin-fermikitINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhet
87.7796
92.4607
83.5496
48.0211
7763633772515211474
96.9099
mlin-fermikitINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
77.4004
63.2326
99.7503
28.0442
5168300551931313
100.0000
mlin-fermikitINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
92.4964
96.7963
88.5622
52.1231
54991825482708693
97.8814
mlin-fermikitINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
88.2321
85.5737
91.0609
53.6742
2687745312683226342540
96.4313
mlin-fermikitINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
90.3770
92.9127
87.9760
55.1468
127829751273117401664
95.6322
mlin-fermikitINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
78.2556
64.3957
99.7182
32.7011
5983330860151717
100.0000
mlin-fermikitINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
93.5003
97.0335
90.2153
59.9508
81122488086877859
97.9475
mlin-fermikitINDELD1_5lowcmp_SimpleRepeat_diTR_11to50*
90.5721
88.6430
92.5871
36.0947
2175327872172017391695
97.4698
mlin-fermikitINDELD1_5lowcmp_SimpleRepeat_diTR_11to50het
92.0469
94.0521
90.1255
39.8201
9788619976610701036
96.8224
mlin-fermikitINDELD1_5lowcmp_SimpleRepeat_diTR_11to50hetalt
82.8097
70.7958
99.7345
26.8052
4875201148831313
100.0000
mlin-fermikitINDELD1_5lowcmp_SimpleRepeat_diTR_11to50homalt
94.5664
97.8336
91.5103
35.6834
70901577071656646
98.4756
mlin-fermikitINDELD1_5lowcmp_SimpleRepeat_diTR_51to200*
41.4591
33.4290
54.5667
44.1830
233464233194191
98.4536
mlin-fermikitINDELD1_5lowcmp_SimpleRepeat_diTR_51to200het
41.1619
58.5185
31.7460
42.9003
795660129126
97.6744
mlin-fermikitINDELD1_5lowcmp_SimpleRepeat_diTR_51to200hetalt
31.5161
18.7373
99.1071
42.5641
9239911111
100.0000
mlin-fermikitINDELD1_5lowcmp_SimpleRepeat_diTR_51to200homalt
62.9442
87.3239
49.2063
47.2803
629626464
100.0000
mlin-fermikitINDELD1_5lowcmp_SimpleRepeat_homopolymer_6to10*
98.6770
98.2373
99.1206
53.5009
2491244724909221216
97.7376
mlin-fermikitINDELD1_5lowcmp_SimpleRepeat_homopolymer_6to10het
98.6655
98.1110
99.2262
52.5551
1449127914491113109
96.4602
mlin-fermikitINDELD1_5lowcmp_SimpleRepeat_homopolymer_6to10hetalt
95.9599
92.4574
99.7382
69.8024
3803138111
100.0000
mlin-fermikitINDELD1_5lowcmp_SimpleRepeat_homopolymer_6to10homalt
98.7994
98.6540
98.9452
53.8867
1004113710037107106
99.0654
mlin-fermikitINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10*
50.0000
100.0000
33.3333
99.9973
10122
100.0000
mlin-fermikitINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
mlin-fermikitINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
50.0000
100.0000
33.3333
99.9675
10122
100.0000
mlin-fermikitINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
mlin-fermikitINDELD1_5lowcmp_SimpleRepeat_quadTR_11to50*
94.6745
93.2968
96.0934
44.0771
1107979611069450425
94.4444
mlin-fermikitINDELD1_5lowcmp_SimpleRepeat_quadTR_11to50het
95.6924
96.0989
95.2894
42.1888
64542626453319300
94.0439
mlin-fermikitINDELD1_5lowcmp_SimpleRepeat_quadTR_11to50hetalt
83.8710
72.2706
99.9075
34.6038
1079414108011
100.0000
mlin-fermikitINDELD1_5lowcmp_SimpleRepeat_quadTR_11to50homalt
96.5901
96.7267
96.4539
49.3016
35461203536130124
95.3846
mlin-fermikitINDELD1_5lowcmp_SimpleRepeat_quadTR_51to200*
69.4588
63.4740
76.6895
52.7315
782450783238217
91.1765
mlin-fermikitINDELD1_5lowcmp_SimpleRepeat_quadTR_51to200het
73.8152
89.0909
63.0112
55.9378
34342339199180
90.4523
mlin-fermikitINDELD1_5lowcmp_SimpleRepeat_quadTR_51to200hetalt
56.8282
39.6923
100.0000
35.3808
25839226300
mlin-fermikitINDELD1_5lowcmp_SimpleRepeat_quadTR_51to200homalt
86.8106
91.8782
82.2727
58.6466
181161813937
94.8718
mlin-fermikitINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
mlin-fermikitINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000
mlin-fermikitINDELD1_5lowcmp_SimpleRepeat_triTR_11to50*
95.7607
94.8001
96.7410
36.3288
38652123859130125
96.1538
mlin-fermikitINDELD1_5lowcmp_SimpleRepeat_triTR_11to50het
96.3317
97.1116
95.5642
35.5358
221966221910398
95.1456
mlin-fermikitINDELD1_5lowcmp_SimpleRepeat_triTR_11to50hetalt
85.0062
74.2424
99.4203
29.8780
34311934322
100.0000
mlin-fermikitINDELD1_5lowcmp_SimpleRepeat_triTR_11to50homalt
98.0394
97.9699
98.1089
39.1064
13032712972525
100.0000
mlin-fermikitINDELD1_5lowcmp_SimpleRepeat_triTR_51to200*
58.9928
54.6667
64.0625
54.2857
4134412322
95.6522
mlin-fermikitINDELD1_5lowcmp_SimpleRepeat_triTR_51to200het
56.5217
100.0000
39.3939
54.1667
130132019
95.0000
mlin-fermikitINDELD1_5lowcmp_SimpleRepeat_triTR_51to200hetalt
51.5152
34.6939
100.0000
32.0000
17321700
mlin-fermikitINDELD1_5lowcmp_SimpleRepeat_triTR_51to200homalt
81.4815
84.6154
78.5714
67.4419
1121133
100.0000
mlin-fermikitINDELD1_5map_l100_m0_e0*
68.2636
57.4739
84.0407
76.2404
4963674959478
82.9787