PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
85551-85600 / 86044 show all
anovak-vgINDEL*map_l250_m0_e0*
64.4116
67.9487
61.2245
98.1965
5325603820
52.6316
anovak-vgINDEL*map_l250_m0_e0het
64.3289
71.6981
58.3333
98.2533
3815423012
40.0000
anovak-vgINDEL*map_l250_m0_e0hetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDEL*map_l250_m0_e0homalt
64.2857
60.0000
69.2308
98.0168
15101888
100.0000
anovak-vgINDEL*map_l250_m1_e0*
66.8127
69.1803
64.6018
96.2450
2119421912061
50.8333
anovak-vgINDEL*map_l250_m1_e0het
64.7498
67.8947
61.8834
96.6176
129611388529
34.1176
anovak-vgINDEL*map_l250_m1_e0hetalt
0.0000
33.3333
0.0000
0.0000
24000
anovak-vgINDEL*map_l250_m1_e0homalt
71.5666
73.3945
69.8276
95.2322
8029813532
91.4286
anovak-vgINDEL*map_l250_m2_e0*
67.7533
69.7885
65.8333
96.4399
23110023712363
51.2195
anovak-vgINDEL*map_l250_m2_e0het
65.7491
68.0952
63.5593
96.7649
143671508629
33.7209
anovak-vgINDEL*map_l250_m2_e0hetalt
0.0000
33.3333
0.0000
0.0000
24000
anovak-vgINDEL*map_l250_m2_e0homalt
72.3983
74.7826
70.1613
95.5950
8629873734
91.8919
anovak-vgINDEL*map_l250_m2_e1*
67.7462
69.9700
65.6593
96.4861
23310023912563
50.4000
anovak-vgINDEL*map_l250_m2_e1het
65.6155
68.2464
63.1799
96.7945
144671518829
32.9545
anovak-vgINDEL*map_l250_m2_e1hetalt
0.0000
33.3333
0.0000
0.0000
24000
anovak-vgINDEL*map_l250_m2_e1homalt
72.6272
75.0000
70.4000
95.6911
8729883734
91.8919
anovak-vgINDEL*map_siren*
72.9885
73.1309
72.8467
79.6324
54191991548920461378
67.3509
anovak-vgINDEL*map_sirenhet
71.2155
65.8829
77.4874
82.2828
297015383084896298
33.2589
anovak-vgINDEL*map_sirenhetalt
0.0000
27.5304
0.0000
0.0000
68179000
anovak-vgINDEL*map_sirenhomalt
77.1234
89.6798
67.6512
75.5300
2381274240511501080
93.9130
anovak-vgINDEL*segdup*
73.2929
72.4961
74.1075
94.2874
18537031889660536
81.2121
anovak-vgINDEL*segduphet
72.6201
63.5061
84.7882
95.6374
93153598117691
51.7045
anovak-vgINDEL*segduphetalt
0.0000
21.5385
0.0000
0.0000
28102000
anovak-vgINDEL*segduphomalt
76.7205
93.1250
65.2299
92.3073
89466908484445
91.9421
anovak-vgINDEL*segdupwithalt*
100.0000
100.0000
100.0000
99.9973
10100
anovak-vgINDEL*segdupwithalthet
100.0000
100.0000
100.0000
99.9956
10100
anovak-vgINDEL*segdupwithalthetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDEL*segdupwithalthomalt
0.0000
100.0000
00000
anovak-vgINDEL*tech_badpromoters*
66.4036
56.5789
80.3571
44.5545
4333451110
90.9091
anovak-vgINDEL*tech_badpromotershet
55.6267
41.0256
86.3636
38.8889
16231933
100.0000
anovak-vgINDEL*tech_badpromotershetalt
0.0000
50.0000
0.0000
0.0000
22000
anovak-vgINDEL*tech_badpromotershomalt
76.1124
75.7576
76.4706
47.6923
2582687
87.5000
anovak-vgINDELC16_PLUS**
0.0000
0.0000
20.0000
90.1961
00140
0.0000
anovak-vgINDELC16_PLUS*het
0.0000
0.0000
25.0000
90.2439
00130
0.0000
anovak-vgINDELC16_PLUS*hetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELC16_PLUS*homalt
0.0000
0.0000
90.0000
00010
0.0000
anovak-vgINDELC16_PLUSHG002complexvar*
0.0000
0.0000
33.3333
85.7143
00120
0.0000
anovak-vgINDELC16_PLUSHG002complexvarhet
0.0000
0.0000
33.3333
83.3333
00120
0.0000
anovak-vgINDELC16_PLUSHG002complexvarhetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELC16_PLUSHG002complexvarhomalt
0.0000
100.0000
00000
anovak-vgINDELC16_PLUSHG002compoundhet*
0.0000
0.0000
87.5000
00010
0.0000
anovak-vgINDELC16_PLUSHG002compoundhethet
0.0000
0.0000
87.5000
00010
0.0000
anovak-vgINDELC16_PLUSHG002compoundhethetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELC16_PLUSHG002compoundhethomalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELC16_PLUSdecoy*
0.0000
100.0000
00000
anovak-vgINDELC16_PLUSdecoyhet
0.0000
100.0000
00000
anovak-vgINDELC16_PLUSdecoyhetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELC16_PLUSdecoyhomalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELC16_PLUSfunc_cds*
0.0000
0.0000
0.0000
00000
anovak-vgINDELC16_PLUSfunc_cdshet
0.0000
0.0000
0.0000
00000