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Explore HG002 comparison results
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Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
84001-84050 / 86044 show all
anovak-vgINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhet
45.3035
36.1272
60.7287
71.8358
1252211509738
39.1753
anovak-vgINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
35.7143
0.0000
0.0000
3054000
anovak-vgINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
59.4656
87.5000
45.0363
57.4665
17525186227205
90.3084
anovak-vgINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
01000
anovak-vgINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
anovak-vgINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
01000
anovak-vgINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
anovak-vgINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged*
56.8863
58.4740
55.3825
72.7189
797566818659497
75.4173
anovak-vgINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhet
49.2182
39.3273
65.7559
77.6192
30446936118852
27.6596
anovak-vgINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
0.0000
42.8571
0.0000
0.0000
4864000
anovak-vgINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
64.4166
93.0962
49.2457
68.6592
44533457471445
94.4798
anovak-vgINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged*
58.4075
59.7906
57.0870
76.5044
571384584439331
75.3986
anovak-vgINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
49.9912
39.7086
67.4603
80.7634
21833125512324
19.5122
anovak-vgINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
0.0000
45.0000
0.0000
0.0000
2733000
anovak-vgINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
66.1849
94.2197
51.0078
73.0013
32620329316307
97.1519
anovak-vgINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged*
32.6056
25.2495
46.0100
54.7659
253749369433324
74.8268
anovak-vgINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhet
43.3697
38.1944
50.1672
54.4901
110178300298216
72.4832
anovak-vgINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
16.2975
0.0000
0.0000
103529000
anovak-vgINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhomalt
39.9479
48.7805
33.8235
55.5556
404269135108
80.0000
anovak-vgINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
anovak-vgINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
anovak-vgINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
anovak-vgINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged*
47.1342
38.1966
61.5321
37.8247
26394270521332592660
81.6201
anovak-vgINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhet
53.2015
46.3732
62.3880
36.5667
748865403924351935
79.4661
anovak-vgINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
0.0000
30.1700
0.0000
0.0000
14023245000
anovak-vgINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhomalt
66.0268
75.3467
58.7588
41.5789
4891601174824725
87.9854
anovak-vgINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged*
49.1489
40.2731
63.0429
36.1826
23893543484828422348
82.6179
anovak-vgINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhet
54.7235
48.0480
63.5530
34.9033
640692374221461725
80.3821
anovak-vgINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
0.0000
32.2661
0.0000
0.0000
13002729000
anovak-vgINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhomalt
68.9415
78.6340
61.3762
40.0333
4491221106696623
89.5115
anovak-vgINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged*
49.1325
41.4437
60.3241
51.4691
34854924606839913216
80.5813
anovak-vgINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhet
51.1017
43.2290
62.4805
48.0708
10631396439826411993
75.4638
anovak-vgINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
0.0000
30.3646
0.0000
0.0000
14493323000
anovak-vgINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
66.2455
82.5976
55.2980
57.8918
973205167013501223
90.5926
anovak-vgINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
53.3229
48.2739
59.5513
59.8591
776183161072472845656
77.6496
anovak-vgINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
50.2462
41.8069
62.9545
59.3735
26843736661438922524
64.8510
anovak-vgINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
0.0000
31.0550
0.0000
0.0000
18314065000
anovak-vgINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
67.0250
86.3068
54.7854
60.5199
3246515411033923132
92.3349
anovak-vgINDELI1_5lowcmp_SimpleRepeat_diTR_11to50*
50.6371
40.3001
68.1066
40.7912
23103422674831602890
91.4557
anovak-vgINDELI1_5lowcmp_SimpleRepeat_diTR_11to50het
50.7904
39.6185
70.7374
39.8375
540823513221231902
89.5902
anovak-vgINDELI1_5lowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
33.0618
0.0000
0.0000
12582547000
anovak-vgINDELI1_5lowcmp_SimpleRepeat_diTR_11to50homalt
72.9057
90.7801
60.9122
43.2513
5125216161037988
95.2748
anovak-vgINDELI1_5lowcmp_SimpleRepeat_diTR_51to200*
19.5313
12.1359
50.0000
45.6954
25181414138
92.6829
anovak-vgINDELI1_5lowcmp_SimpleRepeat_diTR_51to200het
47.6190
44.4444
51.2821
43.8849
1215403835
92.1053
anovak-vgINDELI1_5lowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
7.2626
0.0000
0.0000
13166000
anovak-vgINDELI1_5lowcmp_SimpleRepeat_diTR_51to200homalt
0.0000
0.0000
25.0000
66.6667
00133
100.0000
anovak-vgINDELI1_5lowcmp_SimpleRepeat_homopolymer_6to10*
59.0705
52.5583
67.4247
65.2810
13971261302414611247
85.3525
anovak-vgINDELI1_5lowcmp_SimpleRepeat_homopolymer_6to10het
41.7184
27.7293
84.1930
71.7265
3819931518285107
37.5439
anovak-vgINDELI1_5lowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
26.8987
0.0000
0.0000
85231000