PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
83851-83900 / 86044 show all
anovak-vgSNP*map_l150_m0_e0hetalt
0.0000
66.6667
0.0000
0.0000
21000
anovak-vgSNP*map_l150_m0_e0homalt
84.1702
73.1719
99.0595
77.5693
2992109729492825
89.2857
anovak-vgSNP*map_l150_m1_e0*
79.3251
85.8375
73.7311
78.7422
2627443352597492542118
22.8874
anovak-vgSNP*map_l150_m1_e0het
75.5953
89.9876
65.1719
80.5681
1738219341719391882064
22.4641
anovak-vgSNP*map_l150_m1_e0hetalt
0.0000
25.0000
0.0000
0.0000
515000
anovak-vgSNP*map_l150_m1_e0homalt
87.8735
78.8344
99.2540
70.4677
8887238687816654
81.8182
anovak-vgSNP*map_l150_m2_e0*
79.6445
85.9852
74.1747
80.0306
2738844642707694272180
23.1251
anovak-vgSNP*map_l150_m2_e0het
75.9821
90.0512
65.7151
81.6508
1813020031793393562121
22.6699
anovak-vgSNP*map_l150_m2_e0hetalt
0.0000
25.0000
0.0000
0.0000
515000
anovak-vgSNP*map_l150_m2_e0homalt
88.0238
79.0922
99.2294
72.9596
9253244691437159
83.0986
anovak-vgSNP*map_l150_m2_e1*
79.7323
86.0571
74.2735
80.0613
2771944912739894902194
23.1191
anovak-vgSNP*map_l150_m2_e1het
76.0838
90.1144
65.8336
81.6880
1835020131814994192135
22.6669
anovak-vgSNP*map_l150_m2_e1hetalt
0.0000
25.0000
0.0000
0.0000
515000
anovak-vgSNP*map_l150_m2_e1homalt
88.0784
79.1748
99.2382
72.9549
9364246392497159
83.0986
anovak-vgSNP*map_l250_m0_e0*
72.9992
77.5176
68.9786
95.8110
16554801641738163
22.0867
anovak-vgSNP*map_l250_m0_e0het
70.3786
80.8101
62.3323
96.0946
12172891208730157
21.5068
anovak-vgSNP*map_l250_m0_e0hetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNP*map_l250_m0_e0homalt
81.4814
69.6343
98.1859
93.8468
43819143386
75.0000
anovak-vgSNP*map_l250_m1_e0*
74.3435
81.2102
68.5475
91.2491
5865135758192670600
22.4719
anovak-vgSNP*map_l250_m1_e0het
70.8783
85.8044
60.3757
91.8863
408067540502658592
22.2724
anovak-vgSNP*map_l250_m1_e0hetalt
0.0000
25.0000
0.0000
0.0000
13000
anovak-vgSNP*map_l250_m1_e0homalt
83.7735
72.4320
99.3262
87.5733
17846791769128
66.6667
anovak-vgSNP*map_l250_m2_e0*
75.1311
81.7121
69.5312
91.5463
6443144263922801650
23.2060
anovak-vgSNP*map_l250_m2_e0het
71.8617
86.4074
61.5077
92.1188
448870644552788641
22.9914
anovak-vgSNP*map_l250_m2_e0hetalt
0.0000
20.0000
0.0000
0.0000
14000
anovak-vgSNP*map_l250_m2_e0homalt
83.9868
72.7476
99.3333
88.4225
19547321937139
69.2308
anovak-vgSNP*map_l250_m2_e1*
75.2143
81.7954
69.6133
91.5868
6533145464812829654
23.1177
anovak-vgSNP*map_l250_m2_e1het
71.9604
86.4932
61.6087
92.1600
455371145192816645
22.9048
anovak-vgSNP*map_l250_m2_e1hetalt
0.0000
20.0000
0.0000
0.0000
14000
anovak-vgSNP*map_l250_m2_e1homalt
84.0320
72.8109
99.3418
88.4510
19797391962139
69.2308
anovak-vgSNP*map_siren*
88.0035
90.6441
85.5124
59.7358
13254713681130863221715290
23.8600
anovak-vgSNP*map_sirenhet
84.8820
91.5981
79.0836
63.1144
83346764582394217924974
22.8249
anovak-vgSNP*map_sirenhetalt
0.0000
25.9259
0.0000
0.0000
2160000
anovak-vgSNP*map_sirenhomalt
93.9262
89.1653
99.2241
49.9600
49180597648469379316
83.3773
anovak-vgSNP*segdup*
97.8173
97.8231
97.8116
92.2860
2745661127219609236
38.7521
anovak-vgSNP*segduphet
97.2290
97.3206
97.1375
93.7111
1685346416696492128
26.0163
anovak-vgSNP*segduphetalt
0.0000
14.2857
0.0000
0.0000
16000
anovak-vgSNP*segduphomalt
98.7938
98.6875
98.9004
87.8317
1060214110523117108
92.3077
anovak-vgSNP*segdupwithalt*
0.0000
100.0000
00000
anovak-vgSNP*segdupwithalthet
0.0000
100.0000
00000
anovak-vgSNP*segdupwithalthetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNP*segdupwithalthomalt
0.0000
100.0000
00000
anovak-vgSNP*tech_badpromoters*
89.4635
84.0764
95.5882
39.8230
1322513066
100.0000
anovak-vgSNP*tech_badpromotershet
84.5070
77.9221
92.3077
45.8333
60176055
100.0000
anovak-vgSNP*tech_badpromotershetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNP*tech_badpromotershomalt
94.1001
90.0000
98.5915
33.0189
7287011
100.0000
anovak-vgSNPti**
98.4812
98.2960
98.6672
19.8346
20499803553820437292760712786
46.3143
anovak-vgSNPti*het
98.0963
98.0413
98.1515
22.3908
1256788251091253632236109204
38.9835
anovak-vgSNPti*hetalt
0.0000
15.8076
0.0000
0.0000
92490000
anovak-vgSNPti*homalt
99.1281
98.7623
99.4967
15.3503
793100993979009739973582
89.6172