PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
83551-83600 / 86044 show all
anovak-vgINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
0.0000
18.8235
0.0000
0.0000
1669000
anovak-vgINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
60.8555
82.6087
48.1707
53.0086
7616798574
87.0588
anovak-vgINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged*
46.3519
40.9091
53.4653
59.0264
991431089471
75.5319
anovak-vgINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
37.4335
27.0492
60.7595
65.3509
3389483114
45.1613
anovak-vgINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
0.0000
17.3077
0.0000
0.0000
943000
anovak-vgINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
61.6716
83.8235
48.7805
53.5849
5711606357
90.4762
anovak-vgINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged*
16.9764
10.8209
39.3750
52.0958
58478639777
79.3814
anovak-vgINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhet
23.2825
16.1074
41.9847
51.3011
24125557663
82.8947
anovak-vgINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
7.7135
0.0000
0.0000
28335000
anovak-vgINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhomalt
26.2295
25.0000
27.5862
55.3846
61882114
66.6667
anovak-vgINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
anovak-vgINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
anovak-vgINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged*
32.2728
22.6804
55.9262
35.3818
7922700157612421045
84.1385
anovak-vgINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhet
36.6612
27.4933
55.0021
33.8540
20453812811048886
84.5420
anovak-vgINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
0.0000
18.6688
0.0000
0.0000
4742065000
anovak-vgINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhomalt
57.0043
54.0284
60.3272
41.7857
11497295194159
81.9588
anovak-vgINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged*
34.4736
24.7232
56.9231
34.0999
737224415171148971
84.5819
anovak-vgINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhet
39.0307
30.0166
55.7823
32.5275
1814221230975826
84.7179
anovak-vgINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
0.0000
20.4566
0.0000
0.0000
4481742000
anovak-vgINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhomalt
59.8171
57.4468
62.3913
40.7216
10880287173145
83.8150
anovak-vgINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged*
33.8729
24.3264
55.7519
39.1474
9482949173513771147
83.2970
anovak-vgINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhet
36.4602
27.1762
55.3790
36.8827
25668613591095912
83.2877
anovak-vgINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
0.0000
18.7595
0.0000
0.0000
4962148000
anovak-vgINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
59.9388
63.0225
57.1429
46.3295
196115376282235
83.3333
anovak-vgINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
37.5716
28.2822
55.9480
46.5176
17884534258220331650
81.1608
anovak-vgINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
36.8196
27.4987
55.6992
44.8224
5421429185214731170
79.4297
anovak-vgINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
0.0000
20.2779
0.0000
0.0000
7152811000
anovak-vgINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
60.2265
64.3636
56.5891
50.4418
531294730560480
85.7143
anovak-vgINDELI6_15lowcmp_SimpleRepeat_diTR_11to50*
36.9586
26.4511
61.3160
39.5013
638177416961070978
91.4019
anovak-vgINDELI6_15lowcmp_SimpleRepeat_diTR_11to50het
43.8638
34.2213
61.0721
38.4199
1673211390886815
91.9865
anovak-vgINDELI6_15lowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
20.3275
0.0000
0.0000
3601411000
anovak-vgINDELI6_15lowcmp_SimpleRepeat_diTR_11to50homalt
67.1212
72.5490
62.4490
44.0639
11142306184163
88.5870
anovak-vgINDELI6_15lowcmp_SimpleRepeat_diTR_51to200*
4.0816
2.1739
33.3333
62.5000
290242
50.0000
anovak-vgINDELI6_15lowcmp_SimpleRepeat_diTR_51to200het
16.6667
11.1111
33.3333
57.1429
18242
50.0000
anovak-vgINDELI6_15lowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
1.2048
0.0000
0.0000
182000
anovak-vgINDELI6_15lowcmp_SimpleRepeat_diTR_51to200homalt
0.0000
100.0000
00000
anovak-vgINDELI6_15lowcmp_SimpleRepeat_homopolymer_6to10*
46.1295
40.0000
54.4776
81.4147
6293736139
63.9344
anovak-vgINDELI6_15lowcmp_SimpleRepeat_homopolymer_6to10het
24.9332
16.1290
54.9020
84.7305
105228238
34.7826
anovak-vgINDELI6_15lowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
20.4545
0.0000
0.0000
935000
anovak-vgINDELI6_15lowcmp_SimpleRepeat_homopolymer_6to10homalt
67.0246
87.7551
54.2169
78.5530
436453831
81.5789
anovak-vgINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
02000
anovak-vgINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
anovak-vgINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
0.0000
0.0000
02000
anovak-vgINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
anovak-vgINDELI6_15lowcmp_SimpleRepeat_quadTR_11to50*
39.0803
30.2044
55.3435
41.1500
399922725585494
84.4444
anovak-vgINDELI6_15lowcmp_SimpleRepeat_quadTR_11to50het
31.9699
22.4138
55.7303
40.4682
104360496394328
83.2487
anovak-vgINDELI6_15lowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
22.1529
0.0000
0.0000
142499000
anovak-vgINDELI6_15lowcmp_SimpleRepeat_quadTR_11to50homalt
61.6176
70.8333
54.5238
42.5445
15363229191166
86.9110