PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
83501-83550 / 86044 show all
anovak-vgINDELI1_5tech_badpromoters*
63.6735
54.5455
76.4706
51.4286
12101343
75.0000
anovak-vgINDELI1_5tech_badpromotershet
37.5000
25.0000
75.0000
69.2308
26311
100.0000
anovak-vgINDELI1_5tech_badpromotershetalt
0.0000
100.0000
0.0000
0.0000
10000
anovak-vgINDELI1_5tech_badpromotershomalt
72.8745
69.2308
76.9231
40.9091
941032
66.6667
anovak-vgINDELI6_15**
44.4248
38.7222
52.0973
38.6048
961215211951487486474
74.0055
anovak-vgINDELI6_15*het
35.7228
26.3530
55.4313
44.2246
26447389431234671789
51.6008
anovak-vgINDELI6_15*hetalt
0.0000
22.5588
0.0000
0.0000
19296622000
anovak-vgINDELI6_15*homalt
61.4755
80.7661
49.6232
33.6435
50391200520252814685
88.7143
anovak-vgINDELI6_15HG002complexvar*
48.0486
41.4858
57.0779
45.2877
19882804200815101270
84.1060
anovak-vgINDELI6_15HG002complexvarhet
40.0214
28.2378
68.6825
52.4803
6651690954435281
64.5977
anovak-vgINDELI6_15HG002complexvarhetalt
0.0000
24.9387
0.0000
0.0000
305918000
anovak-vgINDELI6_15HG002complexvarhomalt
62.2576
83.8550
49.5068
39.2928
101819610541075989
92.0000
anovak-vgINDELI6_15HG002compoundhet*
31.2822
22.7666
49.9744
31.5356
19986778195419561488
76.0736
anovak-vgINDELI6_15HG002compoundhethet
35.5369
25.4808
58.7053
30.0691
5315517231212975
80.4455
anovak-vgINDELI6_15HG002compoundhethetalt
0.0000
22.5606
0.0000
0.0000
19266611000
anovak-vgINDELI6_15HG002compoundhethomalt
34.1743
61.2903
23.6923
35.6011
1912231744513
68.9516
anovak-vgINDELI6_15decoy*
0.0000
100.0000
00000
anovak-vgINDELI6_15decoyhet
0.0000
100.0000
00000
anovak-vgINDELI6_15decoyhetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELI6_15decoyhomalt
0.0000
100.0000
00000
anovak-vgINDELI6_15func_cds*
63.7892
60.4651
67.5000
37.5000
2617271310
76.9231
anovak-vgINDELI6_15func_cdshet
56.0784
45.8333
72.2222
40.0000
11131353
60.0000
anovak-vgINDELI6_15func_cdshetalt
0.0000
25.0000
0.0000
0.0000
13000
anovak-vgINDELI6_15func_cdshomalt
75.6757
93.3333
63.6364
35.2941
1411487
87.5000
anovak-vgINDELI6_15lowcmp_AllRepeats_51to200bp_gt95identity_merged*
23.7087
15.9091
46.5116
54.5317
133703140161125
77.6398
anovak-vgINDELI6_15lowcmp_AllRepeats_51to200bp_gt95identity_mergedhet
28.1418
19.8381
48.4018
54.7521
4919810611390
79.6460
anovak-vgINDELI6_15lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
9.6226
0.0000
0.0000
51479000
anovak-vgINDELI6_15lowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
47.6231
55.9322
41.4634
53.9326
3326344835
72.9167
anovak-vgINDELI6_15lowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
anovak-vgINDELI6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
anovak-vgINDELI6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELI6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
anovak-vgINDELI6_15lowcmp_AllRepeats_lt51bp_gt95identity_merged*
39.2875
29.5634
58.5440
45.2777
15713743308021811823
83.5855
anovak-vgINDELI6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
37.7291
27.7742
58.8070
42.9448
4281113229716091324
82.2871
anovak-vgINDELI6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
21.6987
0.0000
0.0000
6772443000
anovak-vgINDELI6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
63.8608
71.3629
57.7860
51.0477
466187783572499
87.2378
anovak-vgINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331*
37.5716
28.2822
55.9480
46.5176
17884534258220331650
81.1608
anovak-vgINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331het
36.8196
27.4987
55.6992
44.8224
5421429185214731170
79.4297
anovak-vgINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
0.0000
20.2779
0.0000
0.0000
7152811000
anovak-vgINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331homalt
60.2265
64.3636
56.5891
50.4418
531294730560480
85.7143
anovak-vgINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged*
43.2688
35.3933
55.6522
57.2491
63115645138
74.5098
anovak-vgINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhet
37.5202
27.1605
60.6557
60.8974
2259372417
70.8333
anovak-vgINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
21.3115
0.0000
0.0000
1348000
anovak-vgINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
60.8696
77.7778
50.0000
52.2124
288272721
77.7778
anovak-vgINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
anovak-vgINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
anovak-vgINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
anovak-vgINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged*
45.1042
39.2655
52.9825
57.7778
13921515113499
73.8806
anovak-vgINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhet
36.7207
26.5537
59.5041
62.8834
47130724925
51.0204