PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1657 1658 1659 1660 1661 1662 1663 1664 1665 ... 1720 1721 » 83001-83050 / 86044 show all
astatham-gatk	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	*		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	*		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	*		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	het		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_SimpleRepeat_diTR_11to50	*		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_SimpleRepeat_diTR_11to50	het		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_SimpleRepeat_diTR_11to50	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_SimpleRepeat_diTR_11to50	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_SimpleRepeat_diTR_51to200	*		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_SimpleRepeat_diTR_51to200	het		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_SimpleRepeat_diTR_51to200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_SimpleRepeat_diTR_51to200	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_SimpleRepeat_homopolymer_6to10	*		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_SimpleRepeat_homopolymer_6to10	het		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_SimpleRepeat_homopolymer_6to10	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_SimpleRepeat_homopolymer_6to10	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_SimpleRepeat_homopolymer_gt10	*		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_SimpleRepeat_homopolymer_gt10	het		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_SimpleRepeat_homopolymer_gt10	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_SimpleRepeat_homopolymer_gt10	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_SimpleRepeat_quadTR_11to50	*		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_SimpleRepeat_quadTR_11to50	het		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_SimpleRepeat_quadTR_11to50	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_SimpleRepeat_quadTR_11to50	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_SimpleRepeat_quadTR_51to200	*		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_SimpleRepeat_quadTR_51to200	het		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_SimpleRepeat_quadTR_51to200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_SimpleRepeat_quadTR_51to200	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_SimpleRepeat_quadTR_gt200	*		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_SimpleRepeat_quadTR_gt200	het		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_SimpleRepeat_quadTR_gt200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_SimpleRepeat_quadTR_gt200	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_SimpleRepeat_triTR_11to50	*		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_SimpleRepeat_triTR_11to50	het		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_SimpleRepeat_triTR_11to50	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_SimpleRepeat_triTR_11to50	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	C16_PLUS	lowcmp_SimpleRepeat_triTR_51to200	*		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	SNP	*	map_l125_m0_e0	het	89.5045	81.3803	99.4306	82.1625	10306	2358	10303	59	18	30.5085

PrecisionFDA Truth Challenge

PrecisionFDA
Truth Challenge