PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
82901-82950 / 86044 show all
astatham-gatkINDEL*map_l150_m2_e0*
96.6049
95.8807
97.3400
91.1929
1350581354377
18.9189
astatham-gatkINDEL*map_l150_m2_e0het
95.2620
94.1501
96.4004
91.7487
85353857324
12.5000
astatham-gatkINDEL*map_l150_m2_e0hetalt
97.5610
95.2381
100.0000
95.4233
2012000
astatham-gatkINDEL*map_l150_m2_e0homalt
99.0654
99.1684
98.9627
89.4829
477447753
60.0000
astatham-gatkINDEL*map_l150_m2_e1*
96.4999
95.6915
97.3221
91.2120
1377621381388
21.0526
astatham-gatkINDEL*map_l150_m2_e1het
95.1831
93.9394
96.4602
91.7945
86856872324
12.5000
astatham-gatkINDEL*map_l150_m2_e1hetalt
95.4545
91.3043
100.0000
95.3020
2122100
astatham-gatkINDEL*map_l150_m2_e1homalt
98.9858
99.1870
98.7854
89.4512
488448864
66.6667
astatham-gatkINDEL*map_l250_m0_e0*
90.3614
96.1538
85.2273
97.7873
75375132
15.3846
astatham-gatkINDEL*map_l250_m0_e0het
88.6957
96.2264
82.2581
97.8268
51251111
9.0909
astatham-gatkINDEL*map_l250_m0_e0hetalt
0.0000
100.0000
00000
astatham-gatkINDEL*map_l250_m0_e0homalt
94.1176
96.0000
92.3077
97.4806
2412421
50.0000
astatham-gatkINDEL*map_l250_m1_e0*
95.1613
96.7213
93.6508
96.0377
29510295204
20.0000
astatham-gatkINDEL*map_l250_m1_e0het
93.5733
95.7895
91.4573
96.4356
1828182172
11.7647
astatham-gatkINDEL*map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
97.0297
60600
astatham-gatkINDEL*map_l250_m1_e0homalt
97.7169
98.1651
97.2727
94.9192
107210732
66.6667
astatham-gatkINDEL*map_l250_m2_e0*
95.3800
96.6767
94.1176
96.2801
32011320204
20.0000
astatham-gatkINDEL*map_l250_m2_e0het
93.9252
95.7143
92.2018
96.5943
2019201172
11.7647
astatham-gatkINDEL*map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
97.5806
60600
astatham-gatkINDEL*map_l250_m2_e0homalt
97.8355
98.2609
97.4138
95.3432
113211332
66.6667
astatham-gatkINDEL*map_l250_m2_e1*
95.4074
96.6967
94.1520
96.3590
32211322204
20.0000
astatham-gatkINDEL*map_l250_m2_e1het
93.9535
95.7346
92.2374
96.6702
2029202172
11.7647
astatham-gatkINDEL*map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
97.6378
60600
astatham-gatkINDEL*map_l250_m2_e1homalt
97.8541
98.2759
97.4359
95.4333
114211432
66.6667
astatham-gatkINDEL*map_siren*
97.4708
96.1673
98.8100
83.5327
712628471418620
23.2558
astatham-gatkINDEL*map_sirenhet
96.3193
94.2990
98.4281
84.3550
42512574258688
11.7647
astatham-gatkINDEL*map_sirenhetalt
96.8685
93.9271
100.0000
86.9855
2321523400
astatham-gatkINDEL*map_sirenhomalt
99.4364
99.5480
99.3251
81.5279
26431226491812
66.6667
astatham-gatkINDEL*segdup*
98.7115
98.8654
98.5581
94.6872
25272925293710
27.0270
astatham-gatkINDEL*segduphet
98.4019
98.7040
98.1017
95.1947
1447191447282
7.1429
astatham-gatkINDEL*segduphetalt
96.8254
93.8462
100.0000
94.7122
122812400
astatham-gatkINDEL*segduphomalt
99.4292
99.7917
99.0693
93.6623
958295898
88.8889
astatham-gatkINDEL*segdupwithalt*
100.0000
100.0000
100.0000
99.9974
10100
astatham-gatkINDEL*segdupwithalthet
100.0000
100.0000
100.0000
99.9960
10100
astatham-gatkINDEL*segdupwithalthetalt
0.0000
100.0000
00000
astatham-gatkINDEL*segdupwithalthomalt
0.0000
100.0000
00000
astatham-gatkINDEL*tech_badpromoters*
99.3377
98.6842
100.0000
55.0898
7517500
astatham-gatkINDEL*tech_badpromotershet
98.7013
97.4359
100.0000
53.6585
3813800
astatham-gatkINDEL*tech_badpromotershetalt
100.0000
100.0000
100.0000
50.0000
40400
astatham-gatkINDEL*tech_badpromotershomalt
100.0000
100.0000
100.0000
57.1429
3303300
astatham-gatkINDELC16_PLUS**
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUS*het
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUS*hetalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUS*homalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSHG002complexvar*
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSHG002complexvarhet
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSHG002complexvarhetalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSHG002complexvarhomalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSHG002compoundhet*
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC16_PLUSHG002compoundhethet
0.0000
0.0000
0.0000
00000