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Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
82751-82800 / 86044 show all
astatham-gatkINDEL**hetalt
96.8001
94.0563
99.7088
58.1664
237371500239687069
98.5714
astatham-gatkINDEL**homalt
99.5755
99.8874
99.2657
58.8575
125031141125041925908
98.1622
astatham-gatkINDEL*HG002complexvar*
99.4827
99.2916
99.6745
58.3541
7639354576257249212
85.1406
astatham-gatkINDEL*HG002complexvarhet
99.5588
99.3119
99.8070
57.7885
45894318455168855
62.5000
astatham-gatkINDEL*HG002complexvarhetalt
96.3890
94.5391
98.3127
68.6296
349720237296463
98.4375
astatham-gatkINDEL*HG002complexvarhomalt
99.7747
99.9075
99.6422
57.3610
2700225270129794
96.9072
astatham-gatkINDEL*HG002compoundhet*
95.0088
94.7931
95.2256
62.9264
2840015602828214181407
99.2243
astatham-gatkINDEL*HG002compoundhethet
93.2853
98.3879
88.6859
79.4067
4028663786483475
98.3437
astatham-gatkINDEL*HG002compoundhethetalt
96.8345
94.0747
99.7612
51.5025
236881492238125756
98.2456
astatham-gatkINDEL*HG002compoundhethomalt
60.8541
99.7085
43.7900
84.6320
6842684878876
99.7722
astatham-gatkINDEL*decoy*
100.0000
100.0000
100.0000
99.9347
1001000
astatham-gatkINDEL*decoyhet
100.0000
100.0000
100.0000
99.9426
60600
astatham-gatkINDEL*decoyhetalt
100.0000
100.0000
100.0000
99.8374
10100
astatham-gatkINDEL*decoyhomalt
100.0000
100.0000
100.0000
99.9296
30300
astatham-gatkINDEL*func_cds*
99.5531
99.7753
99.3318
44.9080
444144631
33.3333
astatham-gatkINDEL*func_cdshet
99.5392
100.0000
99.0826
50.0000
214021620
0.0000
astatham-gatkINDEL*func_cdshetalt
88.8889
80.0000
100.0000
60.0000
41400
astatham-gatkINDEL*func_cdshomalt
99.7792
100.0000
99.5595
38.4824
226022611
100.0000
astatham-gatkINDEL*lowcmp_AllRepeats_51to200bp_gt95identity_merged*
94.9849
94.4009
95.5762
69.0899
95095649355433393
90.7621
astatham-gatkINDEL*lowcmp_AllRepeats_51to200bp_gt95identity_mergedhet
95.4126
96.9059
93.9646
79.4691
39151253612232195
84.0517
astatham-gatkINDEL*lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
93.9775
89.0167
99.5238
40.0705
340442035531717
100.0000
astatham-gatkINDEL*lowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
95.5706
99.1399
92.2494
66.0177
2190192190184181
98.3696
astatham-gatkINDEL*lowcmp_AllRepeats_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
99.3816
2002000
astatham-gatkINDEL*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
99.4222
1201200
astatham-gatkINDEL*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
96.7391
30300
astatham-gatkINDEL*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.5305
50500
astatham-gatkINDEL*lowcmp_AllRepeats_lt51bp_gt95identity_merged*
99.1675
99.0429
99.2924
73.5960
9354590493452666582
87.3874
astatham-gatkINDEL*lowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
99.3786
99.4717
99.2856
75.6401
4801625547805344267
77.6163
astatham-gatkINDEL*lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
97.7545
95.9460
99.6325
60.1730
14792625149105554
98.1818
astatham-gatkINDEL*lowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
99.5289
99.9220
99.1388
74.4236
307372430737267261
97.7528
astatham-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331*
98.2824
98.0398
98.5261
67.2886
64070128163840955849
88.9005
astatham-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331het
98.6446
98.9272
98.3637
73.5579
3015332729696494401
81.1741
astatham-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
97.0426
94.5944
99.6209
40.6185
15802903160296160
98.3607
astatham-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331homalt
98.7705
99.7193
97.8396
67.4095
181155118115400388
97.0000
astatham-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged*
97.8091
97.3562
98.2662
76.6111
20995720973720
54.0541
astatham-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhet
97.8006
97.5318
98.0707
78.8291
1225311220247
29.1667
astatham-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
93.2907
87.4251
100.0000
68.6975
1462114900
astatham-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
98.7788
99.3179
98.2456
73.2684
72857281313
100.0000
astatham-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
99.4518
1701700
astatham-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
99.4947
1001000
astatham-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
96.3855
30300
astatham-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.6150
40400
astatham-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged*
99.5798
99.5507
99.6089
75.0780
50962350942010
50.0000
astatham-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhet
99.5829
99.5667
99.5991
76.3025
2987132981124
33.3333
astatham-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
98.0429
96.5665
99.5652
76.2642
225822911
100.0000
astatham-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
99.7617
99.8940
99.6298
72.6774
18842188475
71.4286
astatham-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged*
99.7930
99.8068
99.7792
75.7754
36167361683
37.5000
astatham-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
99.8362
99.8597
99.8128
76.4258
21353213341
25.0000
astatham-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
98.0901
96.9697
99.2366
79.9080
128413011
100.0000
astatham-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
99.8893
100.0000
99.7788
74.1369
13530135331
33.3333