PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
81851-81900 / 86044 show all
astatham-gatkINDELD6_15HG002complexvarhomalt
99.4894
100.0000
98.9839
62.9548
1169011691212
100.0000
astatham-gatkINDELD6_15HG002compoundhet*
95.7191
95.2165
96.2270
36.2319
85994328595337334
99.1098
astatham-gatkINDELD6_15HG002compoundhethet
89.8182
98.2477
82.7210
68.4623
84115833174172
98.8506
astatham-gatkINDELD6_15HG002compoundhethetalt
97.1670
94.8841
99.5625
24.4483
773441777383433
97.0588
astatham-gatkINDELD6_15HG002compoundhethomalt
27.1186
100.0000
15.6863
70.9677
24024129129
100.0000
astatham-gatkINDELD6_15decoy*
100.0000
100.0000
100.0000
99.9120
10100
astatham-gatkINDELD6_15decoyhet
0.0000
100.0000
00000
astatham-gatkINDELD6_15decoyhetalt
100.0000
100.0000
100.0000
99.1379
10100
astatham-gatkINDELD6_15decoyhomalt
0.0000
100.0000
00000
astatham-gatkINDELD6_15func_cds*
100.0000
100.0000
100.0000
56.1224
4304300
astatham-gatkINDELD6_15func_cdshet
100.0000
100.0000
100.0000
53.2258
2902900
astatham-gatkINDELD6_15func_cdshetalt
100.0000
100.0000
100.0000
60.0000
20200
astatham-gatkINDELD6_15func_cdshomalt
100.0000
100.0000
100.0000
61.2903
1201200
astatham-gatkINDELD6_15lowcmp_AllRepeats_51to200bp_gt95identity_merged*
93.9904
93.0008
95.0013
54.6571
36542753649192181
94.2708
astatham-gatkINDELD6_15lowcmp_AllRepeats_51to200bp_gt95identity_mergedhet
93.2615
97.1904
89.6378
74.6299
9342789110393
90.2913
astatham-gatkINDELD6_15lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
94.3126
89.6450
99.4931
30.6266
212124521591111
100.0000
astatham-gatkINDELD6_15lowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
93.6669
99.5017
88.4786
52.4912
59935997877
98.7179
astatham-gatkINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
97.1014
60600
astatham-gatkINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
97.8261
30300
astatham-gatkINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
88.8889
20200
astatham-gatkINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
98.0392
10100
astatham-gatkINDELC1_5map_l125_m2_e0hetalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC1_5map_l125_m2_e0homalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC1_5map_l125_m2_e1*
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC1_5map_l125_m2_e1het
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC1_5map_l125_m2_e1hetalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC1_5map_l125_m2_e1homalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC1_5map_l150_m0_e0*
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC1_5map_l150_m0_e0het
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC1_5map_l150_m0_e0hetalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC1_5map_l150_m0_e0homalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC1_5map_l150_m1_e0*
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC1_5map_l150_m1_e0het
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC1_5map_l150_m1_e0hetalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC1_5map_l150_m1_e0homalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC1_5map_l150_m2_e0*
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC1_5map_l150_m2_e0het
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC1_5map_l150_m2_e0hetalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC1_5map_l150_m2_e0homalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC1_5map_l150_m2_e1*
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC1_5map_l150_m2_e1het
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC1_5map_l150_m2_e1hetalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC1_5map_l150_m2_e1homalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC1_5map_l250_m0_e0*
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC1_5map_l250_m0_e0het
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC1_5map_l250_m0_e0hetalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC1_5map_l250_m0_e0homalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC1_5map_l250_m1_e0*
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC1_5map_l250_m1_e0het
0.0000
0.0000
0.0000
00000
astatham-gatkINDELC1_5map_l250_m1_e0hetalt
0.0000
0.0000
0.0000
00000