PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
80401-80450 / 86044 show all
asubramanian-gatkINDELD1_5map_l250_m2_e1het
84.3373
86.0656
82.6772
96.9962
10517105222
9.0909
asubramanian-gatkINDELD1_5map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
98.1707
30300
asubramanian-gatkINDELD1_5map_l250_m2_e1homalt
91.0714
85.0000
98.0769
95.5932
5195110
0.0000
asubramanian-gatkINDELD1_5map_siren*
94.8669
91.8674
98.0688
84.1980
32422873250648
12.5000
asubramanian-gatkINDELD1_5map_sirenhet
93.3358
89.7672
97.1998
84.8319
20442332048595
8.4746
asubramanian-gatkINDELD1_5map_sirenhetalt
97.5610
95.2381
100.0000
90.8987
8048000
asubramanian-gatkINDELD1_5map_sirenhomalt
97.6001
95.7192
99.5563
81.8284
111850112253
60.0000
asubramanian-gatkINDELD1_5segdup*
98.9561
98.7307
99.1826
95.3977
108914109291
11.1111
asubramanian-gatkINDELD1_5segduphet
98.6259
98.4104
98.8423
95.7351
6811168380
0.0000
asubramanian-gatkINDELD1_5segduphetalt
99.0291
98.0769
100.0000
95.6266
5115200
asubramanian-gatkINDELD1_5segduphomalt
99.5816
99.4429
99.7207
94.5193
357235711
100.0000
asubramanian-gatkINDELD1_5segdupwithalt*
100.0000
100.0000
100.0000
99.9949
10100
asubramanian-gatkINDELD1_5segdupwithalthet
100.0000
100.0000
100.0000
99.9927
10100
asubramanian-gatkINDELD1_5segdupwithalthetalt
0.0000
100.0000
00000
asubramanian-gatkINDELD1_5segdupwithalthomalt
0.0000
100.0000
00000
asubramanian-gatkINDELD1_5tech_badpromoters*
97.2973
94.7368
100.0000
48.5714
1811800
asubramanian-gatkINDELD1_5tech_badpromotershet
100.0000
100.0000
100.0000
55.5556
80800
asubramanian-gatkINDELD1_5tech_badpromotershetalt
100.0000
100.0000
100.0000
0.0000
20200
asubramanian-gatkINDELD1_5tech_badpromotershomalt
94.1176
88.8889
100.0000
46.6667
81800
asubramanian-gatkINDELD6_15**
97.6552
97.1179
98.1984
55.4499
2534075225346465420
90.3226
asubramanian-gatkINDELD6_15*het
98.3985
98.5594
98.2382
63.4201
1142516711375204176
86.2745
asubramanian-gatkINDELD6_15*hetalt
96.0019
93.4549
98.6916
34.2221
7639535769410298
96.0784
asubramanian-gatkINDELD6_15*homalt
98.3624
99.2096
97.5295
55.4016
6276506277159146
91.8239
asubramanian-gatkINDELD6_15HG002complexvar*
97.5846
96.7748
98.4081
58.8477
513117151318377
92.7711
asubramanian-gatkINDELD6_15HG002complexvarhet
98.2617
97.2756
99.2679
59.9547
30358529832218
81.8182
asubramanian-gatkINDELD6_15HG002complexvarhetalt
93.8487
92.3001
95.4501
48.4274
935789864745
95.7447
asubramanian-gatkINDELD6_15HG002complexvarhomalt
99.0619
99.3157
98.8095
62.8201
1161811621414
100.0000
asubramanian-gatkINDELD6_15HG002compoundhet*
94.5808
93.8213
95.3528
36.4670
84735588474413394
95.3995
asubramanian-gatkINDELD6_15HG002compoundhethet
89.0353
96.6121
82.5605
68.4177
82729819173168
97.1098
asubramanian-gatkINDELD6_15HG002compoundhethetalt
96.1166
93.5100
98.8728
25.0680
762252976318783
95.4023
asubramanian-gatkINDELD6_15HG002compoundhethomalt
23.8806
100.0000
13.5593
67.6417
24024153143
93.4641
asubramanian-gatkINDELD6_15decoy*
100.0000
100.0000
100.0000
99.9306
10100
asubramanian-gatkINDELD6_15decoyhet
0.0000
100.0000
00000
asubramanian-gatkINDELD6_15decoyhetalt
100.0000
100.0000
100.0000
98.8764
10100
asubramanian-gatkINDELD6_15decoyhomalt
0.0000
100.0000
00000
asubramanian-gatkINDELD6_15func_cds*
98.8235
97.6744
100.0000
56.7010
4214200
asubramanian-gatkINDELD6_15func_cdshet
98.2456
96.5517
100.0000
54.0984
2812800
asubramanian-gatkINDELD6_15func_cdshetalt
100.0000
100.0000
100.0000
60.0000
20200
asubramanian-gatkINDELD6_15func_cdshomalt
100.0000
100.0000
100.0000
61.2903
1201200
asubramanian-gatkINDELD6_15lowcmp_AllRepeats_51to200bp_gt95identity_merged*
92.5017
90.8883
94.1735
55.0486
35713583572221201
90.9502
asubramanian-gatkINDELD6_15lowcmp_AllRepeats_51to200bp_gt95identity_mergedhet
92.6261
95.2133
90.1758
75.1797
915468729585
89.4737
asubramanian-gatkINDELD6_15lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
92.5450
87.1936
98.5962
31.1755
206330321073029
96.6667
asubramanian-gatkINDELD6_15lowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
91.8668
98.5050
86.0668
52.0529
59395939687
90.6250
asubramanian-gatkINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
97.0443
60600
asubramanian-gatkINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
97.7941
30300
asubramanian-gatkINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
89.4737
20200
asubramanian-gatkINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
97.9167
10100
asubramanian-gatkINDELD6_15lowcmp_AllRepeats_lt51bp_gt95identity_merged*
97.6849
97.2767
98.0965
60.4473
1561043715615303282
93.0693
asubramanian-gatkINDELD6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
98.0123
98.3920
97.6356
72.4102
5507905492133121
90.9774
asubramanian-gatkINDELD6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
97.0207
95.3171
98.7864
34.4210
649331965128077
96.2500