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Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
80151-80200 / 86044 show all
asubramanian-gatkINDELI1_5*het
99.1412
98.6564
99.6308
61.4273
77979106277980289149
51.5571
asubramanian-gatkINDELI1_5*hetalt
96.2314
93.2470
99.4133
63.4018
10439756105056258
93.5484
asubramanian-gatkINDELI1_5*homalt
99.5606
99.5449
99.5763
55.0778
6015327560163256247
96.4844
asubramanian-gatkINDELI1_5HG002complexvar*
99.2344
98.6572
99.8183
57.3625
32915448329676050
83.3333
asubramanian-gatkINDELI1_5HG002complexvarhet
99.1051
98.3342
99.8882
58.4164
17886303178682013
65.0000
asubramanian-gatkINDELI1_5HG002complexvarhetalt
97.2967
95.4229
99.2455
71.3930
16477917101311
84.6154
asubramanian-gatkINDELI1_5HG002complexvarhomalt
99.6538
99.5092
99.7987
52.7938
1338266133892726
96.2963
asubramanian-gatkINDELI1_5HG002compoundhet*
95.2373
93.5902
96.9436
67.0365
1156479211577365350
95.8904
asubramanian-gatkINDELI1_5HG002compoundhethet
93.5851
96.0000
91.2888
86.8239
816347657370
95.8904
asubramanian-gatkINDELI1_5HG002compoundhethetalt
96.2877
93.2540
99.5255
58.2114
10423754104875046
92.0000
asubramanian-gatkINDELI1_5HG002compoundhethomalt
72.5446
98.7842
57.3192
87.8143
3254325242234
96.6942
asubramanian-gatkINDELI1_5decoy*
0.0000
100.0000
00000
asubramanian-gatkINDELI1_5decoyhet
0.0000
100.0000
00000
asubramanian-gatkINDELI1_5decoyhetalt
0.0000
100.0000
00000
asubramanian-gatkINDELI1_5decoyhomalt
0.0000
100.0000
00000
asubramanian-gatkINDELI1_5func_cds*
99.1720
99.4444
98.9011
44.5122
179118020
0.0000
asubramanian-gatkINDELI1_5func_cdshet
98.3607
100.0000
96.7742
59.4771
5906020
0.0000
asubramanian-gatkINDELI1_5func_cdshetalt
100.0000
100.0000
100.0000
33.3333
20200
asubramanian-gatkINDELI1_5func_cdshomalt
99.5781
99.1597
100.0000
31.3953
118111800
asubramanian-gatkINDELI1_5lowcmp_AllRepeats_51to200bp_gt95identity_merged*
93.6118
90.0651
97.4492
65.8974
165918318724941
83.6735
asubramanian-gatkINDELI1_5lowcmp_AllRepeats_51to200bp_gt95identity_mergedhet
96.7581
95.3172
98.2432
76.2972
63131727138
61.5385
asubramanian-gatkINDELI1_5lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
90.9078
83.8350
99.2840
42.0470
75214583265
83.3333
asubramanian-gatkINDELI1_5lowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
94.2859
97.5265
91.2536
67.7934
27673133028
93.3333
asubramanian-gatkINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
99.7315
10200
asubramanian-gatkINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
0.0000
100.0000
99.7680
00100
asubramanian-gatkINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
97.1429
10100
asubramanian-gatkINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
asubramanian-gatkINDELI1_5lowcmp_AllRepeats_lt51bp_gt95identity_merged*
97.9305
96.9699
98.9103
71.3156
1510547217790196180
91.8367
asubramanian-gatkINDELI1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
98.5568
97.9679
99.1528
76.0152
597812474906452
81.2500
asubramanian-gatkINDELI1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
96.9885
94.6447
99.4513
62.5582
562031861633432
94.1176
asubramanian-gatkINDELI1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
98.4134
99.1518
97.6860
71.1060
35073041379896
97.9592
asubramanian-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331*
97.3409
95.9881
98.7323
65.6784
1543264517602226202
89.3805
asubramanian-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331het
97.9986
97.0872
98.9273
73.5231
623318773788061
76.2500
asubramanian-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
96.2758
93.3345
99.4086
38.9346
550339360513634
94.4444
asubramanian-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331homalt
97.8499
98.2717
97.4317
68.9817
3696654173110107
97.2727
asubramanian-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged*
96.9401
95.3968
98.5342
66.3746
6012960596
66.6667
asubramanian-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhet
97.5075
95.9538
99.1124
69.7674
3321433530
0.0000
asubramanian-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
91.0337
84.5238
98.6301
61.1702
71137211
100.0000
asubramanian-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
98.2630
99.0000
97.5369
60.9615
198219855
100.0000
asubramanian-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
99.7218
10200
asubramanian-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
0.0000
100.0000
99.7585
00100
asubramanian-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
96.9697
10100
asubramanian-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
asubramanian-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged*
99.1530
98.6794
99.6313
77.5757
134518135153
60.0000
asubramanian-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhet
99.2861
98.8357
99.7406
78.6722
764976920
0.0000
asubramanian-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
96.3303
93.7500
99.0566
76.1261
105710511
100.0000
asubramanian-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
99.5820
99.5816
99.5825
75.9054
476247722
100.0000
asubramanian-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged*
99.3694
98.9529
99.7895
80.5964
9451094821
50.0000
asubramanian-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
99.3599
98.9071
99.8168
81.2629
543654510
0.0000
asubramanian-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
97.4359
95.0000
100.0000
82.3529
5735700