PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
80001-80050 / 86044 show all
asubramanian-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
asubramanian-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged*
96.8316
94.3820
99.4118
82.3468
1681016910
0.0000
asubramanian-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhet
95.6522
91.6667
100.0000
82.3636
9999700
asubramanian-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
98.5507
97.1429
100.0000
77.3006
3413700
asubramanian-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
98.5915
100.0000
97.2222
85.6000
3503510
0.0000
asubramanian-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged*
98.3114
97.7528
98.8764
76.5789
8728810
0.0000
asubramanian-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
99.0476
98.1132
100.0000
76.0369
5215200
asubramanian-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
97.4359
95.0000
100.0000
64.9123
1912000
asubramanian-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
96.9697
100.0000
94.1176
83.9623
1601610
0.0000
asubramanian-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged*
89.6330
82.7586
97.7528
84.0215
72158722
100.0000
asubramanian-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhet
89.7959
81.4815
100.0000
92.4528
2252000
asubramanian-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
90.7407
83.0508
100.0000
71.4912
49106500
asubramanian-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhomalt
66.6667
100.0000
50.0000
93.7500
10222
100.0000
asubramanian-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
asubramanian-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
asubramanian-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
asubramanian-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
asubramanian-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged*
91.9411
87.7264
96.5812
72.9667
436615652019
95.0000
asubramanian-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhet
90.8989
84.9624
97.7273
86.2069
1132012933
100.0000
asubramanian-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
92.7463
87.9765
98.0630
55.8289
3004140588
100.0000
asubramanian-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhomalt
87.3239
100.0000
77.5000
85.2941
2303198
88.8889
asubramanian-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged*
92.3613
88.6473
96.4000
70.3264
367474821817
94.4444
asubramanian-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhet
91.2260
85.8491
97.3214
84.7411
911510933
100.0000
asubramanian-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
93.0561
88.8112
97.7273
51.9782
2543234488
100.0000
asubramanian-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhomalt
89.2308
100.0000
80.5556
83.4862
2202976
85.7143
asubramanian-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged*
93.0522
89.5197
96.8750
80.6207
615727442420
83.3333
asubramanian-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhet
92.7523
87.8049
98.2906
88.1579
2163023043
75.0000
asubramanian-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
93.3603
88.9474
98.2340
60.9483
3384244588
100.0000
asubramanian-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
92.0000
100.0000
85.1852
90.2056
61069129
75.0000
asubramanian-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
94.5966
91.5686
97.8316
84.9216
140112915343425
73.5294
asubramanian-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
93.9874
90.0901
98.2372
88.6401
60066613116
54.5455
asubramanian-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
95.5476
92.4127
98.9026
69.5997
6095072188
100.0000
asubramanian-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
93.3398
93.6585
93.0233
91.4274
192132001511
73.3333
asubramanian-gatkINDELI16_PLUSlowcmp_SimpleRepeat_diTR_11to50*
91.9373
88.3333
95.8478
79.7335
424565542421
87.5000
asubramanian-gatkINDELI16_PLUSlowcmp_SimpleRepeat_diTR_11to50het
91.7468
88.1250
95.6790
89.0392
1411915575
71.4286
asubramanian-gatkINDELI16_PLUSlowcmp_SimpleRepeat_diTR_11to50hetalt
92.0804
87.4552
97.2222
61.8644
244353501010
100.0000
asubramanian-gatkINDELI16_PLUSlowcmp_SimpleRepeat_diTR_11to50homalt
91.1519
95.1220
87.5000
86.9767
3924976
85.7143
asubramanian-gatkINDELI16_PLUSlowcmp_SimpleRepeat_diTR_51to200*
66.6667
50.0000
100.0000
93.7500
22200
asubramanian-gatkINDELI16_PLUSlowcmp_SimpleRepeat_diTR_51to200het
50.0000
100.0000
11000
asubramanian-gatkINDELI16_PLUSlowcmp_SimpleRepeat_diTR_51to200hetalt
66.6667
50.0000
100.0000
75.0000
11200
asubramanian-gatkINDELI16_PLUSlowcmp_SimpleRepeat_diTR_51to200homalt
0.0000
100.0000
00000
asubramanian-gatkINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10*
95.6974
93.6170
97.8723
81.0484
4434611
100.0000
asubramanian-gatkINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10het
92.8571
86.6667
100.0000
89.3443
1321300
asubramanian-gatkINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10hetalt
96.5475
96.4286
96.6667
60.5263
2712911
100.0000
asubramanian-gatkINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10homalt
100.0000
100.0000
100.0000
92.0000
40400
asubramanian-gatkINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
00000
asubramanian-gatkINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
asubramanian-gatkINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
100.0000
00000
asubramanian-gatkINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
asubramanian-gatkINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_11to50*
97.2940
95.6186
99.0291
76.0326
3711740843
75.0000