PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
79951-80000 / 86044 show all
asubramanian-gatkINDELD6_15segdupwithalthet
0.0000
100.0000
00000
asubramanian-gatkINDELD6_15segdupwithalthetalt
0.0000
100.0000
00000
asubramanian-gatkINDELD6_15segdupwithalthomalt
0.0000
100.0000
00000
asubramanian-gatkINDELD6_15tech_badpromoters*
100.0000
100.0000
100.0000
51.4286
1701700
asubramanian-gatkINDELD6_15tech_badpromotershet
100.0000
100.0000
100.0000
52.3810
1001000
asubramanian-gatkINDELD6_15tech_badpromotershetalt
100.0000
100.0000
100.0000
0.0000
10100
asubramanian-gatkINDELD6_15tech_badpromotershomalt
100.0000
100.0000
100.0000
53.8462
60600
asubramanian-gatkINDELI16_PLUS**
95.8942
93.7431
98.1463
72.1669
5978399598311395
84.0708
asubramanian-gatkINDELI16_PLUS*het
96.3656
93.7454
99.1366
77.2113
254817025262211
50.0000
asubramanian-gatkINDELI16_PLUS*hetalt
94.3306
90.2765
98.7661
58.9229
189420419212424
100.0000
asubramanian-gatkINDELI16_PLUS*homalt
97.0923
98.3985
95.8203
73.2208
15362515366760
89.5522
asubramanian-gatkINDELI16_PLUSHG002complexvar*
97.0837
95.3400
98.8924
68.3287
12486112501414
100.0000
asubramanian-gatkINDELI16_PLUSHG002complexvarhet
97.3776
95.0376
99.8358
65.4566
6323360811
100.0000
asubramanian-gatkINDELI16_PLUSHG002complexvarhetalt
95.7378
92.8358
98.8270
70.0351
3112433744
100.0000
asubramanian-gatkINDELI16_PLUSHG002complexvarhomalt
97.9133
98.7055
97.1338
71.1927
305430599
100.0000
asubramanian-gatkINDELI16_PLUSHG002compoundhet*
92.8089
90.2940
95.4680
54.0308
193520819389288
95.6522
asubramanian-gatkINDELI16_PLUSHG002compoundhethet
80.8415
91.4894
72.4138
94.0574
4342188
100.0000
asubramanian-gatkINDELI16_PLUSHG002compoundhethetalt
94.3857
90.2532
98.9147
46.6501
188920419142121
100.0000
asubramanian-gatkINDELI16_PLUSHG002compoundhethomalt
8.6957
100.0000
4.5455
78.0731
3036359
93.6508
asubramanian-gatkINDELI16_PLUSdecoy*
0.0000
100.0000
00000
asubramanian-gatkINDELI16_PLUSdecoyhet
0.0000
100.0000
00000
asubramanian-gatkINDELI16_PLUSdecoyhetalt
0.0000
100.0000
00000
asubramanian-gatkINDELI16_PLUSdecoyhomalt
0.0000
100.0000
00000
asubramanian-gatkINDELI16_PLUSfunc_cds*
90.9091
83.3333
100.0000
78.2609
1021000
asubramanian-gatkINDELI16_PLUSfunc_cdshet
94.1176
88.8889
100.0000
70.3704
81800
asubramanian-gatkINDELI16_PLUSfunc_cdshetalt
0.0000
100.0000
01000
asubramanian-gatkINDELI16_PLUSfunc_cdshomalt
100.0000
100.0000
100.0000
88.2353
20200
asubramanian-gatkINDELI16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_merged*
92.2949
87.8641
97.1963
87.9301
1812520863
50.0000
asubramanian-gatkINDELI16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhet
90.9091
84.2105
98.7654
91.5361
80158010
0.0000
asubramanian-gatkINDELI16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
93.8272
88.3721
100.0000
76.0000
761010200
asubramanian-gatkINDELI16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
91.2281
100.0000
83.8710
92.0716
2502653
60.0000
asubramanian-gatkINDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
asubramanian-gatkINDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
asubramanian-gatkINDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
asubramanian-gatkINDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
asubramanian-gatkINDELI16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_merged*
94.5299
91.9369
97.2735
78.9642
10499212133429
85.2941
asubramanian-gatkINDELI16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
94.4646
91.0550
98.1395
85.6905
3973942286
75.0000
asubramanian-gatkINDELI16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
94.7213
91.5952
98.0684
63.9529
534496601313
100.0000
asubramanian-gatkINDELI16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
93.7587
96.7213
90.9722
86.3636
11841311310
76.9231
asubramanian-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331*
94.5966
91.5686
97.8316
84.9216
140112915343425
73.5294
asubramanian-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331het
93.9874
90.0901
98.2372
88.6401
60066613116
54.5455
asubramanian-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
95.5476
92.4127
98.9026
69.5997
6095072188
100.0000
asubramanian-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331homalt
93.3398
93.6585
93.0233
91.4274
192132001511
73.3333
asubramanian-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged*
93.8389
91.6667
96.1165
90.2370
9999941
25.0000
asubramanian-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhet
91.9085
86.3636
98.2143
90.6667
5795510
0.0000
asubramanian-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
86.0140
1802000
asubramanian-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
94.1176
100.0000
88.8889
91.3462
2402431
33.3333
asubramanian-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
asubramanian-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
asubramanian-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000