PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
79501-79550 / 86044 show all
asubramanian-gatkINDELD16_PLUSHG002compoundhethomalt
39.0244
100.0000
24.2424
68.2692
8082523
92.0000
asubramanian-gatkINDELD16_PLUSdecoy*
100.0000
100.0000
100.0000
99.4382
60600
asubramanian-gatkINDELD16_PLUSdecoyhet
100.0000
100.0000
100.0000
99.5056
40400
asubramanian-gatkINDELD16_PLUSdecoyhetalt
0.0000
100.0000
00000
asubramanian-gatkINDELD16_PLUSdecoyhomalt
100.0000
100.0000
100.0000
99.1304
20200
asubramanian-gatkINDELD16_PLUSfunc_cds*
100.0000
100.0000
100.0000
82.3529
1201200
asubramanian-gatkINDELD16_PLUSfunc_cdshet
100.0000
100.0000
100.0000
84.0000
80800
asubramanian-gatkINDELD16_PLUSfunc_cdshetalt
0.0000
0.0000
0.0000
00000
asubramanian-gatkINDELD16_PLUSfunc_cdshomalt
100.0000
100.0000
100.0000
77.7778
40400
asubramanian-gatkINDELD16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_merged*
94.0947
93.5620
94.6334
73.4309
1991137197511296
85.7143
asubramanian-gatkINDELD16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhet
92.3763
96.3910
88.6827
87.4183
641244786153
86.8852
asubramanian-gatkINDELD16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
93.6398
90.0513
97.5262
40.9551
8789710252622
84.6154
asubramanian-gatkINDELD16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
95.8376
96.7213
94.9698
72.2501
472164722521
84.0000
asubramanian-gatkINDELD16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
99.5560
40400
asubramanian-gatkINDELD16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
99.8512
10100
asubramanian-gatkINDELD16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
92.8571
10100
asubramanian-gatkINDELD16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.0698
20200
asubramanian-gatkINDELD16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_merged*
97.5183
97.1076
97.9326
72.3189
345810334587357
78.0822
asubramanian-gatkINDELD16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
96.8698
97.4170
96.3288
83.1947
13203512074634
73.9130
asubramanian-gatkINDELD16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
97.1850
95.5951
98.8287
37.6825
12375713501614
87.5000
asubramanian-gatkINDELD16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
98.7939
98.7939
98.7939
70.6564
90111901119
81.8182
asubramanian-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331*
96.1487
95.7792
96.5210
75.6177
47882114772172130
75.5814
asubramanian-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331het
95.2696
96.9214
93.6732
86.2372
176356152510374
71.8447
asubramanian-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
95.6445
93.2160
98.2030
39.3698
180013120223731
83.7838
asubramanian-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331homalt
97.7654
98.0785
97.4543
75.1188
12252412253225
78.1250
asubramanian-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged*
96.8750
96.8750
96.8750
86.3636
37212372124
33.3333
asubramanian-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhet
95.7479
96.0199
95.4774
88.9136
193819092
22.2222
asubramanian-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
91.8728
90.9091
92.8571
84.4444
1011311
100.0000
asubramanian-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
98.5423
98.2558
98.8304
81.6327
169316921
50.0000
asubramanian-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
99.5444
40400
asubramanian-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
99.8469
10100
asubramanian-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
91.6667
10100
asubramanian-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.0610
20200
asubramanian-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged*
98.5348
97.9369
99.1400
71.5584
8071780773
42.8571
asubramanian-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhet
98.0652
97.2973
98.8453
75.9711
4321242851
20.0000
asubramanian-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
95.1923
94.7368
95.6522
72.2892
1812211
100.0000
asubramanian-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
99.3046
98.8920
99.7207
63.3572
357435711
100.0000
asubramanian-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged*
98.6694
97.7688
99.5868
58.0952
4821148221
50.0000
asubramanian-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
98.3149
97.4074
99.2395
64.1689
263726121
50.0000
asubramanian-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
95.6522
91.6667
100.0000
45.8333
1111300
asubramanian-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
99.2840
98.5782
100.0000
47.6071
208320800
asubramanian-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged*
93.1082
92.7162
93.5035
64.4487
12229612098476
90.4762
asubramanian-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhet
90.2904
97.2376
84.2697
84.6816
352102254241
97.6190
asubramanian-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
93.0029
89.2396
97.0976
37.9705
622757362218
81.8182
asubramanian-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhomalt
94.1176
95.7529
92.5373
60.1190
248112482017
85.0000
asubramanian-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
asubramanian-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
asubramanian-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
asubramanian-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
asubramanian-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged*
95.6598
95.2648
96.0580
63.2518
30581523046125116
92.8000