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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1569 1570 1571 1572 1573 1574 1575 1576 1577 ... 1720 1721 » 78601-78650 / 86044 show all
asubramanian-gatk	INDEL	D1_5	*	*	99.2637	98.9281	99.6016	61.0980	145172	1573	145253	581	383	65.9208
asubramanian-gatk	INDEL	D1_5	*	het	99.3754	99.1025	99.6499	59.9427	86788	786	86804	305	126	41.3115
asubramanian-gatk	INDEL	D1_5	*	hetalt	96.4051	93.9092	99.0373	64.2371	9621	624	9670	94	88	93.6170
asubramanian-gatk	INDEL	D1_5	*	homalt	99.6476	99.6668	99.6283	62.3701	48763	163	48779	182	169	92.8571
asubramanian-gatk	INDEL	D1_5	HG002complexvar	*	99.2090	98.6948	99.7287	58.8075	32288	427	32347	88	75	85.2273
asubramanian-gatk	INDEL	D1_5	HG002complexvar	het	99.2391	98.6082	99.8781	56.4759	20476	289	20484	25	15	60.0000
asubramanian-gatk	INDEL	D1_5	HG002complexvar	hetalt	94.5568	92.7515	96.4339	73.6698	1254	98	1298	48	47	97.9167
asubramanian-gatk	INDEL	D1_5	HG002complexvar	homalt	99.7403	99.6226	99.8582	60.0860	10558	40	10565	15	13	86.6667
asubramanian-gatk	INDEL	D1_5	HG002compoundhet	*	95.6905	94.4340	96.9809	66.6013	11554	681	11564	360	339	94.1667
asubramanian-gatk	INDEL	D1_5	HG002compoundhet	het	95.2389	96.5856	93.9292	78.7201	1669	59	1671	108	103	95.3704
asubramanian-gatk	INDEL	D1_5	HG002compoundhet	hetalt	96.4959	93.9311	99.2046	59.5968	9596	620	9604	77	71	92.2078
asubramanian-gatk	INDEL	D1_5	HG002compoundhet	homalt	76.5563	99.3127	62.2845	86.2762	289	2	289	175	165	94.2857
asubramanian-gatk	INDEL	D1_5	decoy	*	100.0000	100.0000	100.0000	99.9607	4	0	4	0	0
asubramanian-gatk	INDEL	D1_5	decoy	het	100.0000	100.0000	100.0000	99.9759	2	0	2	0	0
asubramanian-gatk	INDEL	D1_5	decoy	hetalt	100.0000	100.0000	100.0000	99.6183	1	0	1	0	0
asubramanian-gatk	INDEL	D1_5	decoy	homalt	100.0000	100.0000	100.0000	99.9387	1	0	1	0	0
asubramanian-gatk	INDEL	D1_5	func_cds	*	100.0000	100.0000	100.0000	50.6173	159	0	160	0	0
asubramanian-gatk	INDEL	D1_5	func_cds	het	100.0000	100.0000	100.0000	59.8131	85	0	86	0	0
asubramanian-gatk	INDEL	D1_5	func_cds	hetalt		0.0000		100.0000	0	0	0	0	0
asubramanian-gatk	INDEL	D1_5	func_cds	homalt	100.0000	100.0000	100.0000	32.1101	74	0	74	0	0
asubramanian-gatk	INDEL	D1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	94.0814	91.6918	96.5990	62.3710	3653	331	3664	129	115	89.1473
asubramanian-gatk	INDEL	D1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	95.7489	95.0355	96.4732	75.4199	1340	70	1313	48	37	77.0833
asubramanian-gatk	INDEL	D1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	92.2194	86.3886	98.8943	32.6995	1574	248	1610	18	16	88.8889
asubramanian-gatk	INDEL	D1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	95.1198	98.2713	92.1642	62.1469	739	13	741	63	62	98.4127
asubramanian-gatk	INDEL	D1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*	100.0000	100.0000	100.0000	98.8741	11	0	11	0	0
asubramanian-gatk	INDEL	D1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het	100.0000	100.0000	100.0000	98.7421	8	0	8	0	0
asubramanian-gatk	INDEL	D1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	97.2973	1	0	1	0	0
asubramanian-gatk	INDEL	D1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt	100.0000	100.0000	100.0000	99.3421	2	0	2	0	0
asubramanian-gatk	INDEL	D1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	98.9428	98.4681	99.4221	74.5651	63444	987	63485	369	305	82.6558
asubramanian-gatk	INDEL	D1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	99.1330	98.7273	99.5420	75.3696	32813	423	32819	151	102	67.5497
asubramanian-gatk	INDEL	D1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	96.9370	94.9441	99.0153	65.4795	8826	470	8849	88	83	94.3182
asubramanian-gatk	INDEL	D1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	99.4891	99.5708	99.4077	75.9619	21805	94	21817	130	120	92.3077
asubramanian-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	97.7710	96.8925	98.6656	61.3340	30432	976	30464	412	353	85.6796
asubramanian-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	98.3287	97.7902	98.8731	68.6335	13453	304	13424	153	111	72.5490
asubramanian-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	96.1607	93.4776	99.0024	33.2299	8685	606	8733	88	82	93.1818
asubramanian-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	98.5930	99.2105	97.9830	63.7025	8294	66	8307	171	160	93.5673
asubramanian-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	*	97.1512	96.0630	98.2644	67.2067	732	30	736	13	8	61.5385
asubramanian-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	het	97.4707	97.2414	97.7011	69.7917	423	12	425	10	5	50.0000
asubramanian-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	hetalt	88.0126	79.7101	98.2456	58.3942	55	14	56	1	1	100.0000
asubramanian-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	98.8342	98.4496	99.2218	63.6492	254	4	255	2	2	100.0000
asubramanian-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	*	100.0000	100.0000	100.0000	98.9236	10	0	10	0	0
asubramanian-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	het	100.0000	100.0000	100.0000	98.8391	7	0	7	0	0
asubramanian-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	96.8750	1	0	1	0	0
asubramanian-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	homalt	100.0000	100.0000	100.0000	99.3197	2	0	2	0	0
asubramanian-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	*	99.2196	98.8975	99.5437	78.3395	1525	17	1527	7	4	57.1429
asubramanian-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	99.1852	99.0239	99.3471	78.2176	913	9	913	6	3	50.0000
asubramanian-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	hetalt	95.8333	93.2432	98.5714	82.3678	69	5	69	1	1	100.0000
asubramanian-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	99.7245	99.4505	100.0000	77.8994	543	3	545	0	0
asubramanian-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	99.4810	99.1533	99.8108	81.4724	1054	9	1055	2	1	50.0000
asubramanian-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	het	99.4652	99.0868	99.8466	80.5547	651	6	651	1	0	0.0000

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