PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1545 1546 1547 1548 1549 1550 1551 1552 1553 ... 1720 1721 » 77401-77450 / 86044 show all
bgallagher-sentieon	INDEL	D6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	98.3899	99.9450	96.8825	62.1062	3636	2	3636	117	115	98.2906
bgallagher-sentieon	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	97.1535	96.7800	97.5299	57.5288	17102	569	17097	433	414	95.6120
bgallagher-sentieon	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	97.7706	98.9737	96.5965	71.2228	5786	60	5733	202	187	92.5743
bgallagher-sentieon	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	96.5254	93.7213	99.5026	29.5295	7553	506	7601	38	37	97.3684
bgallagher-sentieon	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	97.4618	99.9203	95.1213	59.6779	3763	3	3763	193	190	98.4456
bgallagher-sentieon	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	*	97.3494	96.6507	98.0583	76.5108	202	7	202	4	3	75.0000
bgallagher-sentieon	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	het	97.2332	96.8504	97.6190	78.7879	123	4	123	3	2	66.6667
bgallagher-sentieon	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	hetalt	96.0000	92.3077	100.0000	57.6471	36	3	36	0	0
bgallagher-sentieon	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	98.8506	100.0000	97.7273	77.7778	43	0	43	1	1	100.0000
bgallagher-sentieon	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	*	100.0000	100.0000	100.0000	97.8022	4	0	4	0	0
bgallagher-sentieon	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	het	100.0000	100.0000	100.0000	98.3607	2	0	2	0	0
bgallagher-sentieon	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	83.3333	2	0	2	0	0
bgallagher-sentieon	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	C16_PLUS	map_l125_m0_e0	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	C16_PLUS	map_l125_m1_e0	*		0.0000	0.0000	0.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	C16_PLUS	map_l125_m1_e0	het		0.0000	0.0000	0.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	C16_PLUS	map_l125_m1_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	C16_PLUS	map_l125_m1_e0	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	C16_PLUS	map_l125_m2_e0	*		0.0000	0.0000	0.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	C16_PLUS	map_l125_m2_e0	het		0.0000	0.0000	0.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	C16_PLUS	map_l125_m2_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	C16_PLUS	map_l125_m2_e0	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	C16_PLUS	map_l125_m2_e1	*		0.0000	0.0000	0.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	C16_PLUS	map_l125_m2_e1	het		0.0000	0.0000	0.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	C16_PLUS	map_l125_m2_e1	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	C16_PLUS	map_l125_m2_e1	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	C16_PLUS	map_l150_m0_e0	*		0.0000	0.0000	0.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	C16_PLUS	map_l150_m0_e0	het		0.0000	0.0000	0.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	C16_PLUS	map_l150_m0_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	C16_PLUS	map_l150_m0_e0	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	C16_PLUS	map_l150_m1_e0	*		0.0000	0.0000	0.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	C16_PLUS	map_l150_m1_e0	het		0.0000	0.0000	0.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	C16_PLUS	map_l150_m1_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	C16_PLUS	map_l150_m1_e0	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	C16_PLUS	map_l150_m2_e0	*		0.0000	0.0000	0.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	C16_PLUS	map_l150_m2_e0	het		0.0000	0.0000	0.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	C16_PLUS	map_l150_m2_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	C16_PLUS	map_l150_m2_e0	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	C16_PLUS	map_l150_m2_e1	*		0.0000	0.0000	0.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	C16_PLUS	map_l150_m2_e1	het		0.0000	0.0000	0.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	C16_PLUS	map_l150_m2_e1	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	C16_PLUS	map_l150_m2_e1	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	C16_PLUS	map_l250_m0_e0	*		0.0000	0.0000	0.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	C16_PLUS	map_l250_m0_e0	het		0.0000	0.0000	0.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	C16_PLUS	map_l250_m0_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	C16_PLUS	map_l250_m0_e0	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	C16_PLUS	map_l250_m1_e0	*		0.0000	0.0000	0.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	C16_PLUS	map_l250_m1_e0	het		0.0000	0.0000	0.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	C16_PLUS	map_l250_m1_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	C16_PLUS	map_l250_m1_e0	homalt		0.0000	0.0000	0.0000	0	0	0	0	0

PrecisionFDA Truth Challenge

PrecisionFDA
Truth Challenge