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Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
76901-76950 / 86044 show all
bgallagher-sentieonINDEL*lowcmp_AllRepeats_gt200bp_gt95identity_merged*
97.5610
100.0000
95.2381
99.3365
2002010
0.0000
bgallagher-sentieonINDEL*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
99.4118
1201200
bgallagher-sentieonINDEL*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
96.7391
30300
bgallagher-sentieonINDEL*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
90.9091
100.0000
83.3333
99.4192
50510
0.0000
bgallagher-sentieonINDEL*lowcmp_AllRepeats_lt51bp_gt95identity_merged*
99.0261
98.9285
99.1239
73.3821
93437101293346825733
88.8485
bgallagher-sentieonINDEL*lowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
99.3799
99.5525
99.2079
75.4457
4805521647847382297
77.7487
bgallagher-sentieonINDEL*lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
97.2548
94.9731
99.6489
58.8526
14642775147595252
100.0000
bgallagher-sentieonINDEL*lowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
99.3343
99.9317
98.7440
74.3514
307402130740391384
98.2097
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331*
97.9919
97.7475
98.2375
67.0385
6387914726365211421030
90.1926
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331het
98.5824
98.9009
98.2659
73.3042
3014533529694524432
82.4427
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
96.4536
93.4690
99.6351
39.9267
156141091158385857
98.2759
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331homalt
98.3553
99.7468
97.0021
67.1820
181204618120560541
96.6071
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged*
97.5826
97.4026
97.7633
76.4020
21005620984823
47.9167
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhet
97.6882
97.7707
97.6057
78.5372
1228281223309
30.0000
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
92.6045
86.2275
100.0000
68.7898
1442314700
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
98.4449
99.3179
97.5871
73.2136
72857281814
77.7778
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
97.1429
100.0000
94.4444
99.4067
1701710
0.0000
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
99.4856
1001000
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
96.3415
30300
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
88.8889
100.0000
80.0000
99.5040
40410
0.0000
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged*
99.5214
99.5507
99.4922
74.9449
50962350942613
50.0000
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhet
99.5497
99.6000
99.4995
76.1480
2988122982154
26.6667
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
97.8203
96.1373
99.5633
75.6642
224922811
100.0000
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
99.6825
99.8940
99.4720
72.6656
188421884108
80.0000
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged*
99.7380
99.8068
99.6692
75.6445
361673616126
50.0000
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
99.8363
99.9065
99.7662
76.2965
21362213451
20.0000
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
97.6981
96.2121
99.2308
79.2000
127512911
100.0000
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
99.7788
100.0000
99.5585
74.0995
13530135364
66.6667
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged*
93.1903
92.5366
93.8532
64.0267
56294545512361345
95.5679
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhet
94.1465
96.4646
91.9371
77.3623
2101771870164150
91.4634
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
92.6115
86.6324
99.4771
37.4276
235936424731312
92.3077
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhomalt
92.2288
98.9002
86.4006
59.8278
1169131169184183
99.4565
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
97.7273
30300
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
97.9167
20200
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
96.1538
10100
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged*
97.2376
96.9527
97.5243
55.9478
36747115536556928901
97.0905
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhet
98.0194
98.8917
97.1624
67.0369
1445516214073411388
94.4039
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
96.1646
92.9308
99.6316
30.7725
12791973129824848
100.0000
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhomalt
97.4911
99.7899
95.2959
55.3475
9501209501469465
99.1471
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged*
97.9790
97.7713
98.1875
54.9936
3127971331203576562
97.5694
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhet
98.6266
99.2892
97.9729
65.4849
124328912276254243
95.6693
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
96.9869
94.4529
99.6605
29.5910
10489616105693636
100.0000
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhomalt
98.2716
99.9044
96.6913
55.0844
835888358286283
98.9510
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged*
97.4475
97.1963
97.6999
61.5897
42120121541925987925
93.7183
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhet
98.1835
98.9169
97.4610
70.8771
1762619317235449399
88.8641
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
96.1489
92.9019
99.6311
33.4986
13036996132324948
97.9592
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
97.8021
99.7736
95.9069
61.4948
114582611458489478
97.7505
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
97.9919
97.7475
98.2375
67.0385
6387914726365211421030
90.1926
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
98.5824
98.9009
98.2659
73.3042
3014533529694524432
82.4427