PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
76801-76850 / 86044 show all
bgallagher-sentieonSNPtvmap_l100_m1_e0*
99.3526
99.5959
99.1104
66.8404
24402992439821931
14.1553
bgallagher-sentieonSNPtvmap_l100_m1_e0het
99.1089
99.5719
98.6501
70.0769
15351661534721025
11.9048
bgallagher-sentieonSNPtvmap_l100_m1_e0hetalt
97.5000
95.1220
100.0000
70.4545
3923900
bgallagher-sentieonSNPtvmap_l100_m1_e0homalt
99.7786
99.6572
99.9002
59.2105
901231901296
66.6667
bgallagher-sentieonSNPtvmap_l100_m2_e0*
99.3603
99.6045
99.1174
68.4796
24934992493022231
13.9640
bgallagher-sentieonSNPtvmap_l100_m2_e0het
99.1197
99.5817
98.6621
71.4019
15711661570721325
11.7371
bgallagher-sentieonSNPtvmap_l100_m2_e0hetalt
97.5610
95.2381
100.0000
72.7891
4024000
bgallagher-sentieonSNPtvmap_l100_m2_e0homalt
99.7827
99.6636
99.9021
61.6697
918331918396
66.6667
bgallagher-sentieonSNPtvmap_l100_m2_e1*
99.3647
99.6084
99.1222
68.5080
25184992518022331
13.9013
bgallagher-sentieonSNPtvmap_l100_m2_e1het
99.1255
99.5859
98.6693
71.4407
15872661586821425
11.6822
bgallagher-sentieonSNPtvmap_l100_m2_e1hetalt
97.6190
95.3488
100.0000
72.2973
4124100
bgallagher-sentieonSNPtvmap_l100_m2_e1homalt
99.7847
99.6667
99.9030
61.6624
927131927196
66.6667
bgallagher-sentieonSNPtvmap_l125_m0_e0*
98.6421
99.1555
98.1340
76.7581
657556657412519
15.2000
bgallagher-sentieonSNPtvmap_l125_m0_e0het
98.2208
99.1138
97.3437
79.3814
436239436111915
12.6050
bgallagher-sentieonSNPtvmap_l125_m0_e0hetalt
94.1176
88.8889
100.0000
77.1429
81800
bgallagher-sentieonSNPtvmap_l125_m0_e0homalt
99.5036
99.2796
99.7286
68.6827
220516220564
66.6667
bgallagher-sentieonSNPtvmap_l125_m1_e0*
99.1503
99.4630
98.8396
71.8727
15930861592818728
14.9733
bgallagher-sentieonSNPtvmap_l125_m1_e0het
98.8364
99.4173
98.2622
74.9493
10067591006517822
12.3596
bgallagher-sentieonSNPtvmap_l125_m1_e0hetalt
96.5517
93.3333
100.0000
71.4286
2822800
bgallagher-sentieonSNPtvmap_l125_m1_e0homalt
99.7095
99.5734
99.8460
64.1604
583525583596
66.6667
bgallagher-sentieonSNPtvmap_l125_m2_e0*
99.1716
99.4784
98.8667
73.4826
16403861640118828
14.8936
bgallagher-sentieonSNPtvmap_l125_m2_e0het
98.8667
99.4350
98.3049
76.2296
10383591038117922
12.2905
bgallagher-sentieonSNPtvmap_l125_m2_e0hetalt
96.5517
93.3333
100.0000
76.0684
2822800
bgallagher-sentieonSNPtvmap_l125_m2_e0homalt
99.7171
99.5845
99.8500
66.6926
599225599296
66.6667
bgallagher-sentieonSNPtvmap_l125_m2_e1*
99.1800
99.4837
98.8781
73.5318
16571861656918828
14.8936
bgallagher-sentieonSNPtvmap_l125_m2_e1het
98.8786
99.4409
98.3226
76.2835
10494591049217922
12.2905
bgallagher-sentieonSNPtvmap_l125_m2_e1hetalt
96.5517
93.3333
100.0000
76.0684
2822800
bgallagher-sentieonSNPtvmap_l125_m2_e1homalt
99.7197
99.5884
99.8514
66.7125
604925604996
66.6667
bgallagher-sentieonSNPtvmap_l150_m0_e0*
98.4884
99.1375
97.8477
81.2755
41383641379110
10.9890
bgallagher-sentieonSNPtvmap_l150_m0_e0het
97.9977
99.0151
97.0010
83.2079
2815282814877
8.0460
bgallagher-sentieonSNPtvmap_l150_m0_e0hetalt
100.0000
100.0000
100.0000
88.8889
30300
bgallagher-sentieonSNPtvmap_l150_m0_e0homalt
99.5475
99.3976
99.6979
74.9100
13208132043
75.0000
bgallagher-sentieonSNPtvmap_l150_m1_e0*
98.9592
99.3402
98.5810
76.0604
10840721083815625
16.0256
bgallagher-sentieonSNPtvmap_l150_m1_e0het
98.5918
99.3090
97.8850
78.8267
689848689614920
13.4228
bgallagher-sentieonSNPtvmap_l150_m1_e0hetalt
94.7368
90.0000
100.0000
76.3158
1821800
bgallagher-sentieonSNPtvmap_l150_m1_e0homalt
99.6318
99.4425
99.8219
68.7396
392422392475
71.4286
bgallagher-sentieonSNPtvmap_l150_m2_e0*
98.9822
99.3659
98.6015
77.4624
11283721128116025
15.6250
bgallagher-sentieonSNPtvmap_l150_m2_e0het
98.6238
99.3381
97.9198
79.8967
720448720215320
13.0719
bgallagher-sentieonSNPtvmap_l150_m2_e0hetalt
94.7368
90.0000
100.0000
80.0000
1821800
bgallagher-sentieonSNPtvmap_l150_m2_e0homalt
99.6442
99.4612
99.8279
71.1244
406122406175
71.4286
bgallagher-sentieonSNPtvmap_l150_m2_e1*
98.9952
99.3740
98.6193
77.4754
11430721142816025
15.6250
bgallagher-sentieonSNPtvmap_l150_m2_e1het
98.6417
99.3468
97.9466
79.9186
730048729815320
13.0719
bgallagher-sentieonSNPtvmap_l150_m2_e1hetalt
94.7368
90.0000
100.0000
80.0000
1821800
bgallagher-sentieonSNPtvmap_l150_m2_e1homalt
99.6486
99.4678
99.8301
71.0988
411222411275
71.4286
bgallagher-sentieonSNPtvmap_l250_m0_e0*
97.0246
98.0392
96.0307
93.0983
75015750315
16.1290
bgallagher-sentieonSNPtvmap_l250_m0_e0het
96.6350
97.9021
95.4003
93.3341
56012560272
7.4074
bgallagher-sentieonSNPtvmap_l250_m0_e0hetalt
0.0000
100.0000
00000
bgallagher-sentieonSNPtvmap_l250_m0_e0homalt
98.1912
98.4456
97.9381
92.2400
190319043
75.0000
bgallagher-sentieonSNPtvmap_l250_m1_e0*
98.0805
98.4511
97.7128
88.7082
26064126066112
19.6721
bgallagher-sentieonSNPtvmap_l250_m1_e0het
97.5542
98.2093
96.9078
89.8378
1755321755568
14.2857