PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
76601-76650 / 86044 show all
bgallagher-sentieonSNP*lowcmp_SimpleRepeat_diTR_51to200homalt
100.0000
100.0000
100.0000
95.9016
1501500
bgallagher-sentieonSNP*lowcmp_SimpleRepeat_homopolymer_6to10*
99.9156
99.9069
99.9243
55.5895
171611617157138
61.5385
bgallagher-sentieonSNP*lowcmp_SimpleRepeat_homopolymer_6to10het
99.9052
99.8917
99.9188
56.2157
11072121106894
44.4444
bgallagher-sentieonSNP*lowcmp_SimpleRepeat_homopolymer_6to10hetalt
100.0000
100.0000
100.0000
68.7500
50500
bgallagher-sentieonSNP*lowcmp_SimpleRepeat_homopolymer_6to10homalt
99.9343
99.9343
99.9343
54.3868
60844608444
100.0000
bgallagher-sentieonSNP*lowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
00000
bgallagher-sentieonSNP*lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
bgallagher-sentieonSNP*lowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
100.0000
00000
bgallagher-sentieonSNP*lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
bgallagher-sentieonSNP*lowcmp_SimpleRepeat_quadTR_11to50*
99.1348
99.8900
98.3909
39.6771
1816320181602974
1.3468
bgallagher-sentieonSNP*lowcmp_SimpleRepeat_quadTR_11to50het
98.6516
99.8513
97.4804
41.9937
1141617114132952
0.6780
bgallagher-sentieonSNP*lowcmp_SimpleRepeat_quadTR_11to50hetalt
100.0000
100.0000
100.0000
64.2857
50500
bgallagher-sentieonSNP*lowcmp_SimpleRepeat_quadTR_11to50homalt
99.9629
99.9555
99.9703
35.1476
67423674222
100.0000
bgallagher-sentieonSNP*lowcmp_SimpleRepeat_quadTR_51to200*
95.0000
93.0070
97.0803
92.6304
1331013343
75.0000
bgallagher-sentieonSNP*lowcmp_SimpleRepeat_quadTR_51to200het
95.5665
95.0980
96.0396
92.5019
9759743
75.0000
bgallagher-sentieonSNP*lowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.0000
0.0000
00000
bgallagher-sentieonSNP*lowcmp_SimpleRepeat_quadTR_51to200homalt
93.5065
87.8049
100.0000
92.9688
3653600
bgallagher-sentieonSNP*lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
bgallagher-sentieonSNP*lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
bgallagher-sentieonSNP*lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
bgallagher-sentieonSNP*lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
bgallagher-sentieonSNP*lowcmp_SimpleRepeat_triTR_11to50*
99.7691
99.9184
99.6202
33.3544
734967345283
10.7143
bgallagher-sentieonSNP*lowcmp_SimpleRepeat_triTR_11to50het
99.6756
99.9350
99.4176
34.7502
461334609272
7.4074
bgallagher-sentieonSNP*lowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
100.0000
01000
bgallagher-sentieonSNP*lowcmp_SimpleRepeat_triTR_11to50homalt
99.9452
99.9270
99.9635
30.8140
27362273611
100.0000
bgallagher-sentieonSNP*lowcmp_SimpleRepeat_triTR_51to200*
100.0000
100.0000
100.0000
95.7143
90900
bgallagher-sentieonSNP*lowcmp_SimpleRepeat_triTR_51to200het
100.0000
100.0000
100.0000
94.8529
70700
bgallagher-sentieonSNP*lowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
00000
bgallagher-sentieonSNP*lowcmp_SimpleRepeat_triTR_51to200homalt
100.0000
100.0000
100.0000
97.2973
20200
bgallagher-sentieonSNP*map_l100_m0_e0*
99.1340
99.3545
98.9146
69.7273
326292123262535860
16.7598
bgallagher-sentieonSNP*map_l100_m0_e0het
98.8545
99.3162
98.3971
73.2385
210601452105634349
14.2857
bgallagher-sentieonSNP*map_l100_m0_e0hetalt
96.7742
93.7500
100.0000
68.7500
1511500
bgallagher-sentieonSNP*map_l100_m0_e0homalt
99.6507
99.4320
99.8703
60.0283
1155466115541511
73.3333
bgallagher-sentieonSNP*map_l100_m1_e0*
99.4317
99.5636
99.3001
65.4224
720873167207650881
15.9449
bgallagher-sentieonSNP*map_l100_m1_e0het
99.2217
99.5084
98.9366
68.7750
451362234512548563
12.9897
bgallagher-sentieonSNP*map_l100_m1_e0hetalt
97.5000
95.1220
100.0000
70.4545
3923900
bgallagher-sentieonSNP*map_l100_m1_e0homalt
99.7886
99.6630
99.9146
57.7258
2691291269122318
78.2609
bgallagher-sentieonSNP*map_l100_m2_e0*
99.4275
99.5674
99.2880
67.0766
736443207363352881
15.3409
bgallagher-sentieonSNP*map_l100_m2_e0het
99.2145
99.5129
98.9179
70.0977
461732264616250563
12.4752
bgallagher-sentieonSNP*map_l100_m2_e0hetalt
97.5610
95.2381
100.0000
72.7891
4024000
bgallagher-sentieonSNP*map_l100_m2_e0homalt
99.7908
99.6657
99.9162
60.2352
2743192274312318
78.2609
bgallagher-sentieonSNP*map_l100_m2_e1*
99.4314
99.5705
99.2927
67.0857
744163217440553081
15.2830
bgallagher-sentieonSNP*map_l100_m2_e1het
99.2207
99.5181
98.9251
70.1134
466722264666150763
12.4260
bgallagher-sentieonSNP*map_l100_m2_e1hetalt
97.6190
95.3488
100.0000
72.2973
4124100
bgallagher-sentieonSNP*map_l100_m2_e1homalt
99.7911
99.6654
99.9170
60.2187
2770393277032318
78.2609
bgallagher-sentieonSNP*map_l125_m0_e0*
98.8636
99.1953
98.5342
75.8607
192291561922628650
17.4825
bgallagher-sentieonSNP*map_l125_m0_e0het
98.5131
99.1551
97.8793
78.7667
125571071255427240
14.7059
bgallagher-sentieonSNP*map_l125_m0_e0hetalt
94.1176
88.8889
100.0000
77.1429
81800
bgallagher-sentieonSNP*map_l125_m0_e0homalt
99.5370
99.2849
99.7904
67.2503
66644866641410
71.4286
bgallagher-sentieonSNP*map_l125_m1_e0*
99.2644
99.4418
99.0876
71.3529
450742534506841570
16.8675