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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1518 1519 1520 1521 1522 1523 1524 1525 1526 ... 1720 1721 » 76051-76100 / 86044 show all
bgallagher-sentieon	SNP	*	segdup	homalt	99.8883	99.8697	99.9069	88.1168	10729	14	10729	10	10	100.0000
bgallagher-sentieon	SNP	*	segdupwithalt	*		0.0000		100.0000	0	0	0	0	0
bgallagher-sentieon	SNP	*	segdupwithalt	het		0.0000		100.0000	0	0	0	0	0
bgallagher-sentieon	SNP	*	segdupwithalt	hetalt		0.0000		100.0000	0	0	0	0	0
bgallagher-sentieon	SNP	*	segdupwithalt	homalt		0.0000		100.0000	0	0	0	0	0
bgallagher-sentieon	SNP	*	tech_badpromoters	*	98.0769	97.4522	98.7097	49.3464	153	4	153	2	2	100.0000
bgallagher-sentieon	SNP	*	tech_badpromoters	het	98.0132	96.1039	100.0000	51.6340	74	3	74	0	0
bgallagher-sentieon	SNP	*	tech_badpromoters	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
bgallagher-sentieon	SNP	*	tech_badpromoters	homalt	98.1366	98.7500	97.5309	47.0588	79	1	79	2	2	100.0000
bgallagher-sentieon	SNP	ti	*	*	99.9476	99.9680	99.9272	17.4519	2084844	667	2084781	1519	117	7.7024
bgallagher-sentieon	SNP	ti	*	het	99.9232	99.9613	99.8851	18.4052	1281395	496	1281341	1474	76	5.1560
bgallagher-sentieon	SNP	ti	*	hetalt	99.7416	99.4845	100.0000	40.0000	579	3	579	0	0
bgallagher-sentieon	SNP	ti	*	homalt	99.9867	99.9791	99.9944	15.8584	802870	168	802861	45	41	91.1111
bgallagher-sentieon	SNP	ti	HG002complexvar	*	99.9558	99.9337	99.9780	17.4939	508099	337	508035	112	53	47.3214
bgallagher-sentieon	SNP	ti	HG002complexvar	het	99.9477	99.9234	99.9720	16.9632	314525	241	314471	88	29	32.9545
bgallagher-sentieon	SNP	ti	HG002complexvar	hetalt	99.5146	99.0338	100.0000	35.3312	205	2	205	0	0
bgallagher-sentieon	SNP	ti	HG002complexvar	homalt	99.9695	99.9514	99.9876	18.3190	193369	94	193359	24	24	100.0000
bgallagher-sentieon	SNP	ti	HG002compoundhet	*	99.8512	99.8226	99.8798	35.5355	17447	31	17445	21	14	66.6667
bgallagher-sentieon	SNP	ti	HG002compoundhet	het	99.8158	99.7685	99.8631	39.5979	9483	22	9481	13	6	46.1538
bgallagher-sentieon	SNP	ti	HG002compoundhet	hetalt	99.7403	99.4819	100.0000	21.8453	576	3	576	0	0
bgallagher-sentieon	SNP	ti	HG002compoundhet	homalt	99.9053	99.9189	99.8918	30.4822	7388	6	7388	8	8	100.0000
bgallagher-sentieon	SNP	ti	decoy	*		0.0000		100.0000	0	0	0	0	0
bgallagher-sentieon	SNP	ti	decoy	het		0.0000		100.0000	0	0	0	0	0
bgallagher-sentieon	SNP	ti	decoy	hetalt		0.0000		100.0000	0	0	0	0	0
bgallagher-sentieon	SNP	ti	decoy	homalt		0.0000		100.0000	0	0	0	0	0
bgallagher-sentieon	SNP	ti	func_cds	*	99.9094	99.9565	99.8623	22.5049	13781	6	13779	19	0	0.0000
bgallagher-sentieon	SNP	ti	func_cds	het	99.8707	99.9647	99.7769	24.1158	8501	3	8499	19	0	0.0000
bgallagher-sentieon	SNP	ti	func_cds	hetalt	100.0000	100.0000	100.0000	46.6667	8	0	8	0	0
bgallagher-sentieon	SNP	ti	func_cds	homalt	99.9716	99.9431	100.0000	19.6954	5272	3	5272	0	0
bgallagher-sentieon	SNP	ti	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	99.2753	99.1071	99.4439	65.2571	3219	29	3219	18	4	22.2222
bgallagher-sentieon	SNP	ti	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	99.0857	99.0613	99.1102	68.1518	2005	19	2005	18	4	22.2222
bgallagher-sentieon	SNP	ti	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt		0.0000		100.0000	0	0	0	0	0
bgallagher-sentieon	SNP	ti	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	99.5898	99.1830	100.0000	59.0142	1214	10	1214	0	0
bgallagher-sentieon	SNP	ti	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
bgallagher-sentieon	SNP	ti	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
bgallagher-sentieon	SNP	ti	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt		0.0000		100.0000	0	0	0	0	0
bgallagher-sentieon	SNP	ti	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
bgallagher-sentieon	SNP	ti	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	99.7144	99.8963	99.5331	54.5778	27930	29	27929	131	10	7.6336
bgallagher-sentieon	SNP	ti	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	99.5866	99.8768	99.2982	57.0448	17829	22	17828	126	5	3.9683
bgallagher-sentieon	SNP	ti	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	90.9091	83.3333	100.0000	87.8049	5	1	5	0	0
bgallagher-sentieon	SNP	ti	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	99.9456	99.9406	99.9505	49.3379	10096	6	10096	5	5	100.0000
bgallagher-sentieon	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	99.3414	99.5344	99.1492	66.7959	30998	145	30998	266	16	6.0150
bgallagher-sentieon	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	99.0767	99.4790	98.6777	68.4621	19477	102	19477	261	12	4.5977
bgallagher-sentieon	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	100.0000	100.0000	100.0000	83.3333	12	0	12	0	0
bgallagher-sentieon	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	99.7919	99.6278	99.9566	63.4476	11509	43	11509	5	4	80.0000
bgallagher-sentieon	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	*	99.4759	99.4255	99.5264	47.7277	2942	17	2942	14	0	0.0000
bgallagher-sentieon	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	het	99.2629	99.2900	99.2358	50.5266	1818	13	1818	14	0	0.0000
bgallagher-sentieon	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
bgallagher-sentieon	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	99.8224	99.6454	100.0000	42.4180	1124	4	1124	0	0
bgallagher-sentieon	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0

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