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Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
74951-75000 / 86044 show all
cchapple-customINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
0.0000
96.1538
0.0000
0.0000
502000
cchapple-customINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
99.2481
100.0000
98.5075
67.1569
6806611
100.0000
cchapple-customINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged*
93.1021
88.9925
97.6096
61.2654
477594901211
91.6667
cchapple-customINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhet
94.2210
89.9329
98.9384
59.8807
1341546655
100.0000
cchapple-customINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
87.8788
0.0000
0.0000
31944000
cchapple-customINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhomalt
87.2727
100.0000
77.4194
74.5902
2402476
85.7143
cchapple-customINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
cchapple-customINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
cchapple-customINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
cchapple-customINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
cchapple-customINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged*
97.0840
95.2463
98.9940
50.7712
332616634443532
91.4286
cchapple-customINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhet
97.8248
96.2264
99.4772
49.0761
7142832351715
88.2353
cchapple-customINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
0.0000
94.5648
0.0000
0.0000
2401138000
cchapple-customINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhomalt
95.8716
100.0000
92.0705
66.6667
21102091817
94.4444
cchapple-customINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged*
97.6989
96.2429
99.1997
49.1264
286911229752422
91.6667
cchapple-customINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhet
98.5313
97.5124
99.5716
47.3892
5881527891210
83.3333
cchapple-customINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
0.0000
95.5708
0.0000
0.0000
209397000
cchapple-customINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhomalt
96.8750
100.0000
93.9394
65.3240
18801861212
100.0000
cchapple-customINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged*
97.0468
95.1501
99.0206
54.5933
370818938423835
92.1053
cchapple-customINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhet
97.6012
95.7537
99.5214
52.8600
9024035351715
88.2353
cchapple-customINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
0.0000
94.3646
0.0000
0.0000
2495149000
cchapple-customINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
96.6929
100.0000
93.5976
67.5248
31103072120
95.2381
cchapple-customINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
97.3852
95.7925
99.0319
61.6504
605626663426253
85.4839
cchapple-customINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
97.6696
96.0426
99.3526
60.4030
18937855253628
77.7778
cchapple-customINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
0.0000
94.7533
0.0000
0.0000
3341185000
cchapple-customINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
98.2572
99.6364
96.9158
68.2486
82238172625
96.1538
cchapple-customINDELI6_15lowcmp_SimpleRepeat_diTR_11to50*
97.4449
95.8541
99.0894
62.1020
231210023942217
77.2727
cchapple-customINDELI6_15lowcmp_SimpleRepeat_diTR_11to50het
98.5778
97.7459
99.4240
60.7000
477112244139
69.2308
cchapple-customINDELI6_15lowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
94.9746
0.0000
0.0000
168289000
cchapple-customINDELI6_15lowcmp_SimpleRepeat_diTR_11to50homalt
97.0874
100.0000
94.3396
74.8418
153015098
88.8889
cchapple-customINDELI6_15lowcmp_SimpleRepeat_diTR_51to200*
86.5778
77.1739
98.5915
60.3352
71217011
100.0000
cchapple-customINDELI6_15lowcmp_SimpleRepeat_diTR_51to200het
93.4891
88.8889
98.5915
57.4850
817011
100.0000
cchapple-customINDELI6_15lowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
75.9036
0.0000
0.0000
6320000
cchapple-customINDELI6_15lowcmp_SimpleRepeat_diTR_51to200homalt
0.0000
100.0000
00000
cchapple-customINDELI6_15lowcmp_SimpleRepeat_homopolymer_6to10*
98.4061
98.0645
98.7500
82.6464
152315821
50.0000
cchapple-customINDELI6_15lowcmp_SimpleRepeat_homopolymer_6to10het
98.7336
98.3871
99.0826
83.5347
61110810
0.0000
cchapple-customINDELI6_15lowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
95.4545
0.0000
0.0000
422000
cchapple-customINDELI6_15lowcmp_SimpleRepeat_homopolymer_6to10homalt
99.0099
100.0000
98.0392
80.3846
4905011
100.0000
cchapple-customINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10*
100.0000
100.0000
20000
cchapple-customINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
cchapple-customINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
100.0000
0.0000
0.0000
20000
cchapple-customINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
cchapple-customINDELI6_15lowcmp_SimpleRepeat_quadTR_11to50*
98.0504
96.7449
99.3916
61.8066
127843130788
100.0000
cchapple-customINDELI6_15lowcmp_SimpleRepeat_quadTR_11to50het
98.1802
96.7672
99.6350
61.0934
44915109244
100.0000
cchapple-customINDELI6_15lowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
95.7878
0.0000
0.0000
61427000
cchapple-customINDELI6_15lowcmp_SimpleRepeat_quadTR_11to50homalt
98.8506
99.5370
98.1735
65.0160
215121544
100.0000
cchapple-customINDELI6_15lowcmp_SimpleRepeat_quadTR_51to200*
94.7582
92.4731
97.1591
69.7074
1721417152
40.0000
cchapple-customINDELI6_15lowcmp_SimpleRepeat_quadTR_51to200het
92.6667
88.5714
97.1591
68.0581
31417152
40.0000
cchapple-customINDELI6_15lowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
93.3775
0.0000
0.0000
14110000
cchapple-customINDELI6_15lowcmp_SimpleRepeat_quadTR_51to200homalt
0.0000
100.0000
00000