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Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
74901-74950 / 86044 show all
cchapple-customINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10*
82.5297
77.9412
87.6923
96.3565
53155784
50.0000
cchapple-customINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10het
78.9238
72.7273
86.2745
96.2583
32124473
42.8571
cchapple-customINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
88.8889
0.0000
0.0000
81000
cchapple-customINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10homalt
89.6552
86.6667
92.8571
96.6746
1321311
100.0000
cchapple-customINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_11to50*
96.5861
95.4119
97.7895
64.6446
915449292120
95.2381
cchapple-customINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_11to50het
96.4362
95.5112
97.3793
65.7857
383187061918
94.7368
cchapple-customINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
93.5976
0.0000
0.0000
30721000
cchapple-customINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_11to50homalt
98.4644
97.8261
99.1111
60.3873
225522322
100.0000
cchapple-customINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_51to200*
93.7077
92.3701
95.0845
58.6667
569476193228
87.5000
cchapple-customINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_51to200het
94.8694
94.5122
95.2294
59.8083
15595192623
88.4615
cchapple-customINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
89.7143
0.0000
0.0000
31436000
cchapple-customINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_51to200homalt
96.1538
98.0392
94.3396
51.5982
100210065
83.3333
cchapple-customINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
cchapple-customINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
cchapple-customINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
cchapple-customINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
cchapple-customINDELD16_PLUSlowcmp_SimpleRepeat_triTR_11to50*
97.4481
96.8153
98.0892
60.3535
152515433
100.0000
cchapple-customINDELI6_15func_cdshet
100.0000
100.0000
100.0000
36.3636
2402800
cchapple-customINDELI6_15func_cdshetalt
0.0000
75.0000
0.0000
0.0000
31000
cchapple-customINDELI6_15func_cdshomalt
96.7742
100.0000
93.7500
33.3333
1501511
100.0000
cchapple-customINDELI6_15lowcmp_AllRepeats_51to200bp_gt95identity_merged*
93.6192
89.9522
97.5980
66.0369
752847721915
78.9474
cchapple-customINDELI6_15lowcmp_AllRepeats_51to200bp_gt95identity_mergedhet
94.8610
91.4980
98.4807
64.9564
22621713118
72.7273
cchapple-customINDELI6_15lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
88.1132
0.0000
0.0000
46763000
cchapple-customINDELI6_15lowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
93.6508
100.0000
88.0597
74.5247
5905987
87.5000
cchapple-customINDELI6_15lowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
cchapple-customINDELI6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
cchapple-customINDELI6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
cchapple-customINDELI6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
cchapple-customINDELI6_15lowcmp_AllRepeats_lt51bp_gt95identity_merged*
97.9217
96.6692
99.2071
63.7791
513717753804337
86.0465
cchapple-customINDELI6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
98.5026
97.4692
99.5582
62.4506
15023947322116
76.1905
cchapple-customINDELI6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
95.6410
0.0000
0.0000
2984136000
cchapple-customINDELI6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
98.1825
99.6937
96.7164
71.0458
65126482221
95.4545
cchapple-customINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331*
97.3852
95.7925
99.0319
61.6504
605626663426253
85.4839
cchapple-customINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331het
97.6696
96.0426
99.3526
60.4030
18937855253628
77.7778
cchapple-customINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
0.0000
94.7533
0.0000
0.0000
3341185000
cchapple-customINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331homalt
98.2572
99.6364
96.9158
68.2486
82238172625
96.1538
cchapple-customINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged*
94.7598
91.0112
98.8304
71.4047
1621616922
100.0000
cchapple-customINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhet
95.8075
92.5926
99.2537
72.1992
75613311
100.0000
cchapple-customINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
83.6066
0.0000
0.0000
5110000
cchapple-customINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
98.6301
100.0000
97.2973
68.1034
3603611
100.0000
cchapple-customINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
cchapple-customINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
cchapple-customINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
cchapple-customINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
cchapple-customINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged*
98.5758
97.4576
99.7199
68.4629
345935611
100.0000
cchapple-customINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhet
97.9827
96.0452
100.0000
69.1415
170726600
cchapple-customINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
0.0000
97.6471
0.0000
0.0000
832000
cchapple-customINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
99.4475
100.0000
98.9011
66.2963
9209011
100.0000
cchapple-customINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged*
98.5437
97.5207
99.5885
68.2768
236624211
100.0000
cchapple-customINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
98.3333
96.7213
100.0000
68.6833
118417600