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Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
74401-74450 / 86044 show all
cchapple-customINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
0.0000
91.8919
0.0000
0.0000
343000
cchapple-customINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
99.3179
98.6450
100.0000
77.5032
364535500
cchapple-customINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged*
93.3139
89.5894
97.3615
44.5095
216025122146045
75.0000
cchapple-customINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhet
93.7240
89.4737
98.3983
44.3222
6637818433021
70.0000
cchapple-customINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
87.2192
0.0000
0.0000
1126165000
cchapple-customINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhomalt
95.1282
97.8892
92.5187
45.3678
37183713024
80.0000
cchapple-customINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
97.5000
10100
cchapple-customINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
96.9697
10100
cchapple-customINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
cchapple-customINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
cchapple-customINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged*
97.4367
96.0623
98.8510
34.0969
1978581120562239223
93.3054
cchapple-customINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhet
97.4083
95.5986
99.2879
34.0400
705932515476111102
91.8919
cchapple-customINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
0.0000
94.2063
0.0000
0.0000
7626469000
cchapple-customINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhomalt
98.5950
99.6678
97.5451
34.2663
5100175086128121
94.5312
cchapple-customINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged*
97.9495
96.9056
99.0161
33.0779
1769456518416183178
97.2678
cchapple-customINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhet
97.8138
96.2869
99.3900
32.9111
6431248136868481
96.4286
cchapple-customINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
0.0000
95.4885
0.0000
0.0000
6519308000
cchapple-customINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhomalt
98.8715
99.8106
97.9499
33.5489
4744947309997
97.9798
cchapple-customINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged*
97.5436
96.2382
98.8849
41.9802
2141383722170250228
91.2000
cchapple-customINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhet
97.6175
96.0100
99.2797
41.3870
806133516539120106
88.3333
cchapple-customINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
0.0000
94.1392
0.0000
0.0000
7694479000
cchapple-customINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
98.6606
99.5951
97.7434
43.6301
5658235631130122
93.8462
cchapple-customINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
97.9331
96.8097
99.0829
51.7183
30406100231224289257
88.9273
cchapple-customINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
98.0981
96.8525
99.3761
51.0664
1332443322937144122
84.7222
cchapple-customINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
0.0000
94.1987
0.0000
0.0000
8752539000
cchapple-customINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
98.9561
99.6411
98.2804
53.4169
8330308287145135
93.1034
cchapple-customINDELD1_5lowcmp_SimpleRepeat_diTR_11to50*
98.3105
97.4328
99.2041
31.5728
2391063024805199188
94.4724
cchapple-customINDELD1_5lowcmp_SimpleRepeat_diTR_11to50het
98.2782
97.1365
99.4471
33.4959
10109298176269890
91.8367
cchapple-customINDELD1_5lowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
95.4545
0.0000
0.0000
6573313000
cchapple-customINDELD1_5lowcmp_SimpleRepeat_diTR_11to50homalt
99.1720
99.7378
98.6126
26.3903
722819717910198
97.0297
cchapple-customINDELD1_5lowcmp_SimpleRepeat_diTR_51to200*
78.4742
68.8666
91.1972
34.5622
4802175185047
94.0000
cchapple-customINDELD1_5lowcmp_SimpleRepeat_diTR_51to200het
74.1595
60.7407
95.1883
35.4926
82534552320
86.9565
cchapple-customINDELD1_5lowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
68.2281
0.0000
0.0000
335156000
cchapple-customINDELD1_5lowcmp_SimpleRepeat_diTR_51to200homalt
78.2609
88.7324
70.0000
29.1339
638632727
100.0000
cchapple-customINDELD1_5lowcmp_SimpleRepeat_homopolymer_6to10*
99.7531
99.6254
99.8811
52.9851
2526495252093021
70.0000
cchapple-customINDELD1_5lowcmp_SimpleRepeat_homopolymer_6to10het
99.7236
99.5599
99.8877
53.8466
1470565151251710
58.8235
cchapple-customINDELD1_5lowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
95.6204
0.0000
0.0000
39318000
cchapple-customINDELD1_5lowcmp_SimpleRepeat_homopolymer_6to10homalt
99.8767
99.8821
99.8712
51.6311
1016612100841311
84.6154
cchapple-customINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10*
100.0000
100.0000
10000
cchapple-customINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
cchapple-customINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
100.0000
0.0000
0.0000
10000
cchapple-customINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
cchapple-customINDELD1_5lowcmp_SimpleRepeat_quadTR_11to50*
99.4541
99.1074
99.8032
43.2339
11769106116642318
78.2609
cchapple-customINDELD1_5lowcmp_SimpleRepeat_quadTR_11to50het
99.4403
99.1066
99.7762
43.0060
66566080251813
72.2222
cchapple-customINDELD1_5lowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
97.6557
0.0000
0.0000
145835000
cchapple-customINDELD1_5lowcmp_SimpleRepeat_quadTR_11to50homalt
99.7813
99.6999
99.8628
43.7307
365511363955
100.0000
cchapple-customINDELD1_5lowcmp_SimpleRepeat_quadTR_51to200*
96.7357
95.1299
98.3966
42.6150
1172601166199
47.3684
cchapple-customINDELD1_5lowcmp_SimpleRepeat_quadTR_51to200het
96.7502
94.8052
98.7768
42.3619
36520969127
58.3333
cchapple-customINDELD1_5lowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
93.8462
0.0000
0.0000
61040000
cchapple-customINDELD1_5lowcmp_SimpleRepeat_quadTR_51to200homalt
98.2544
100.0000
96.5686
43.8017
197019772
28.5714