PrecisionFDA
Truth Challenge
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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
| Entry | Type | Subtype | Subset | Genotype | F-score | Recall | Precision | Frac_NA | Truth TP | Truth FN | Query TP | Query FP | FP gt | % FP ma | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
72651-72700 / 86044 show all | |||||||||||||||
| ciseli-custom | INDEL | I1_5 | map_l100_m2_e0 | homalt | 54.2174 | 40.3013 | 82.8125 | 83.8994 | 214 | 317 | 212 | 44 | 35 | 79.5455 | |
| ciseli-custom | INDEL | I1_5 | map_l100_m2_e1 | * | 63.6010 | 58.1362 | 70.1998 | 85.9497 | 811 | 584 | 808 | 343 | 294 | 85.7143 | |
| ciseli-custom | INDEL | I1_5 | map_l100_m2_e1 | het | 69.5757 | 72.8395 | 66.5919 | 86.3900 | 590 | 220 | 594 | 298 | 258 | 86.5772 | |
| ciseli-custom | INDEL | I1_5 | map_l100_m2_e1 | hetalt | 0.0000 | 11.1111 | 0.0000 | 0.0000 | 5 | 40 | 0 | 0 | 0 | ||
| ciseli-custom | INDEL | I1_5 | map_l100_m2_e1 | homalt | 53.9043 | 40.0000 | 82.6255 | 84.1880 | 216 | 324 | 214 | 45 | 36 | 80.0000 | |
| ciseli-custom | INDEL | I1_5 | map_l125_m0_e0 | * | 56.0912 | 49.6774 | 64.4068 | 91.5984 | 154 | 156 | 152 | 84 | 66 | 78.5714 | |
| ciseli-custom | INDEL | I1_5 | map_l125_m0_e0 | het | 62.2449 | 63.5417 | 61.0000 | 91.6771 | 122 | 70 | 122 | 78 | 63 | 80.7692 | |
| ciseli-custom | INDEL | I1_5 | map_l125_m0_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 4 | 0 | 0 | 0 | |||
| ciseli-custom | INDEL | I1_5 | map_l125_m0_e0 | homalt | 41.9948 | 28.0702 | 83.3333 | 91.1330 | 32 | 82 | 30 | 6 | 3 | 50.0000 | |
| ciseli-custom | INDEL | I1_5 | map_l125_m1_e0 | * | 58.9106 | 52.7711 | 66.6667 | 88.0351 | 438 | 392 | 436 | 218 | 187 | 85.7798 | |
| ciseli-custom | INDEL | I1_5 | map_l125_m1_e0 | het | 64.3883 | 66.6667 | 62.2605 | 88.3768 | 324 | 162 | 325 | 197 | 169 | 85.7868 | |
| ciseli-custom | INDEL | I1_5 | map_l125_m1_e0 | hetalt | 0.0000 | 5.8824 | 0.0000 | 0.0000 | 1 | 16 | 0 | 0 | 0 | ||
| ciseli-custom | INDEL | I1_5 | map_l125_m1_e0 | homalt | 48.9837 | 34.5566 | 84.0909 | 86.4615 | 113 | 214 | 111 | 21 | 18 | 85.7143 | |
| ciseli-custom | INDEL | I1_5 | map_l125_m2_e0 | * | 59.1149 | 52.9755 | 66.8639 | 88.9180 | 454 | 403 | 452 | 224 | 193 | 86.1607 | |
| ciseli-custom | INDEL | I1_5 | map_l125_m2_e0 | het | 64.4414 | 66.8008 | 62.2430 | 89.2549 | 332 | 165 | 333 | 202 | 174 | 86.1386 | |
| ciseli-custom | INDEL | I1_5 | map_l125_m2_e0 | hetalt | 0.0000 | 5.2632 | 0.0000 | 0.0000 | 1 | 18 | 0 | 0 | 0 | ||
| ciseli-custom | INDEL | I1_5 | map_l125_m2_e0 | homalt | 49.9618 | 35.4839 | 84.3972 | 87.4219 | 121 | 220 | 119 | 22 | 19 | 86.3636 | |
| ciseli-custom | INDEL | I1_5 | map_l125_m2_e1 | * | 59.4882 | 53.3333 | 67.2489 | 88.9869 | 464 | 406 | 462 | 225 | 194 | 86.2222 | |
| ciseli-custom | INDEL | I1_5 | map_l125_m2_e1 | het | 64.8655 | 67.1260 | 62.7523 | 89.2822 | 341 | 167 | 342 | 203 | 175 | 86.2069 | |
| ciseli-custom | INDEL | I1_5 | map_l125_m2_e1 | hetalt | 0.0000 | 5.2632 | 0.0000 | 0.0000 | 1 | 18 | 0 | 0 | 0 | ||
| ciseli-custom | INDEL | I1_5 | map_l125_m2_e1 | homalt | 50.0650 | 35.5685 | 84.5070 | 87.6843 | 122 | 221 | 120 | 22 | 19 | 86.3636 | |
| ciseli-custom | INDEL | I1_5 | map_l150_m0_e0 | * | 51.7241 | 45.4545 | 60.0000 | 94.3966 | 80 | 96 | 78 | 52 | 39 | 75.0000 | |
| ciseli-custom | INDEL | I1_5 | map_l150_m0_e0 | het | 59.3607 | 61.3208 | 57.5221 | 94.3500 | 65 | 41 | 65 | 48 | 38 | 79.1667 | |
| ciseli-custom | INDEL | I1_5 | map_l150_m0_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 3 | 0 | 0 | 0 | |||
| ciseli-custom | INDEL | I1_5 | map_l150_m0_e0 | homalt | 34.6359 | 22.3881 | 76.4706 | 94.6875 | 15 | 52 | 13 | 4 | 1 | 25.0000 | |
| ciseli-custom | INDEL | I1_5 | map_l150_m1_e0 | * | 55.6515 | 48.6166 | 65.0667 | 91.6126 | 246 | 260 | 244 | 131 | 111 | 84.7328 | |
| ciseli-custom | INDEL | I1_5 | map_l150_m1_e0 | het | 62.5043 | 64.2140 | 60.8833 | 91.5127 | 192 | 107 | 193 | 124 | 107 | 86.2903 | |
| ciseli-custom | INDEL | I1_5 | map_l150_m1_e0 | hetalt | 0.0000 | 11.1111 | 0.0000 | 0.0000 | 1 | 8 | 0 | 0 | 0 | ||
| ciseli-custom | INDEL | I1_5 | map_l150_m1_e0 | homalt | 41.0416 | 26.7677 | 87.9310 | 92.1196 | 53 | 145 | 51 | 7 | 4 | 57.1429 | |
| ciseli-custom | INDEL | I1_5 | map_l150_m2_e0 | * | 55.9084 | 48.7476 | 65.5352 | 92.4128 | 253 | 266 | 251 | 132 | 111 | 84.0909 | |
| ciseli-custom | INDEL | I1_5 | map_l150_m2_e0 | het | 62.9373 | 64.4013 | 61.5385 | 92.2212 | 199 | 110 | 200 | 125 | 107 | 85.6000 | |
| ciseli-custom | INDEL | I1_5 | map_l150_m2_e0 | hetalt | 0.0000 | 11.1111 | 0.0000 | 0.0000 | 1 | 8 | 0 | 0 | 0 | ||
| ciseli-custom | INDEL | I1_5 | map_l150_m2_e0 | homalt | 40.5704 | 26.3682 | 87.9310 | 93.3333 | 53 | 148 | 51 | 7 | 4 | 57.1429 | |
| ciseli-custom | INDEL | I1_5 | map_l150_m2_e1 | * | 56.0921 | 48.9642 | 65.6489 | 92.3896 | 260 | 271 | 258 | 135 | 114 | 84.4444 | |
| ciseli-custom | INDEL | I1_5 | map_l150_m2_e1 | het | 63.3474 | 64.9842 | 61.7910 | 92.1527 | 206 | 111 | 207 | 128 | 110 | 85.9375 | |
| ciseli-custom | INDEL | I1_5 | map_l150_m2_e1 | hetalt | 0.0000 | 10.0000 | 0.0000 | 0.0000 | 1 | 9 | 0 | 0 | 0 | ||
| ciseli-custom | INDEL | I1_5 | map_l150_m2_e1 | homalt | 40.1098 | 25.9804 | 87.9310 | 93.5196 | 53 | 151 | 51 | 7 | 4 | 57.1429 | |
| ciseli-custom | INDEL | I1_5 | map_l250_m0_e0 | * | 34.1463 | 29.1667 | 41.1765 | 98.8591 | 7 | 17 | 7 | 10 | 5 | 50.0000 | |
| ciseli-custom | INDEL | I1_5 | map_l250_m0_e0 | het | 37.0370 | 33.3333 | 41.6667 | 99.0603 | 5 | 10 | 5 | 7 | 4 | 57.1429 | |
| ciseli-custom | INDEL | I1_5 | map_l250_m0_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| ciseli-custom | INDEL | I1_5 | map_l250_m0_e0 | homalt | 28.5714 | 22.2222 | 40.0000 | 97.6526 | 2 | 7 | 2 | 3 | 1 | 33.3333 | |
| ciseli-custom | INDEL | I1_5 | map_l250_m1_e0 | * | 43.9560 | 37.7358 | 52.6316 | 97.2333 | 40 | 66 | 40 | 36 | 27 | 75.0000 | |
| ciseli-custom | INDEL | I1_5 | map_l250_m1_e0 | het | 53.5433 | 56.6667 | 50.7463 | 97.1158 | 34 | 26 | 34 | 33 | 26 | 78.7879 | |
| ciseli-custom | INDEL | I1_5 | map_l250_m1_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 2 | 0 | 0 | 0 | |||
| ciseli-custom | INDEL | I1_5 | map_l250_m1_e0 | homalt | 22.6415 | 13.6364 | 66.6667 | 97.8774 | 6 | 38 | 6 | 3 | 1 | 33.3333 | |
| ciseli-custom | INDEL | I1_5 | map_l250_m2_e0 | * | 45.5959 | 38.9381 | 55.0000 | 97.4367 | 44 | 69 | 44 | 36 | 27 | 75.0000 | |
| ciseli-custom | INDEL | I1_5 | map_l250_m2_e0 | het | 54.4118 | 56.0606 | 52.8571 | 97.3242 | 37 | 29 | 37 | 33 | 26 | 78.7879 | |
| ciseli-custom | INDEL | I1_5 | map_l250_m2_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 2 | 0 | 0 | 0 | |||
| ciseli-custom | INDEL | I1_5 | map_l250_m2_e0 | homalt | 25.4545 | 15.5556 | 70.0000 | 98.0198 | 7 | 38 | 7 | 3 | 1 | 33.3333 | |
| ciseli-custom | INDEL | I1_5 | map_l250_m2_e1 | * | 46.1538 | 39.4737 | 55.5556 | 97.4782 | 45 | 69 | 45 | 36 | 27 | 75.0000 | |