PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
72251-72300 / 86044 show all
ciseli-customSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
65.0000
86.6667
52.0000
85.0299
13213121
8.3333
ciseli-customSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331homalt
91.8329
98.7645
85.8105
79.7572
5356675352885251
28.3616
ciseli-customSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged*
84.1283
97.5299
73.9648
66.0177
130333130445912
2.6144
ciseli-customSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhet
78.7997
96.7251
66.4796
66.7555
827288294183
0.7177
ciseli-customSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
91.6667
00010
0.0000
ciseli-customSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
95.4784
98.9605
92.2330
63.8596
4765475409
22.5000
ciseli-customSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ciseli-customSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ciseli-customSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ciseli-customSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ciseli-customSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged*
81.5701
97.8381
69.9407
68.1937
212747212291219
2.0833
ciseli-customSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhet
75.9729
97.1161
62.3900
67.1535
13474013478124
0.4926
ciseli-customSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
66.6667
100.0000
50.0000
86.6667
10110
0.0000
ciseli-customSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
93.5938
99.1094
88.6598
70.4168
77977749915
15.1515
ciseli-customSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged*
82.8316
98.2639
71.5886
71.6226
141525140655811
1.9713
ciseli-customSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
77.6749
97.5930
64.5091
70.4237
892228874881
0.2049
ciseli-customSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
90.9091
10100
ciseli-customSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
93.4194
99.4286
88.0952
73.9938
52235187010
14.2857
ciseli-customSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged*
30.3025
78.7879
18.7586
80.9861
1303513658911
1.8676
ciseli-customSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhet
26.1799
75.0000
15.8576
76.7407
9331985204
0.7692
ciseli-customSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
80.0000
00010
0.0000
ciseli-customSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhomalt
51.3139
90.2439
35.8491
90.7906
37438687
10.2941
ciseli-customSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ciseli-customSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ciseli-customSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ciseli-customSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ciseli-customSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged*
51.6619
87.8340
36.5923
82.4916
124917312802218108
4.8693
ciseli-customSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhet
44.0468
83.2421
29.9463
79.5867
760153781182729
1.5873
ciseli-customSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
28.5714
50.0000
20.0000
72.2222
11140
0.0000
ciseli-customSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhomalt
71.0216
96.2525
56.2712
87.6827
4881949838779
20.4134
ciseli-customSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged*
56.2607
88.9328
41.1449
83.1108
11251401150164597
5.8967
ciseli-customSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhet
48.6704
84.3829
34.1974
80.6855
670124686132025
1.8939
ciseli-customSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
33.3333
50.0000
25.0000
73.3333
11130
0.0000
ciseli-customSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhomalt
73.3002
96.8017
58.9809
87.2316
4541546332272
22.3602
ciseli-customSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged*
69.6749
94.4284
55.2038
82.9047
391523139413198130
4.0650
ciseli-customSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhet
62.8906
92.3251
47.6872
81.6922
24422032464270333
1.2209
ciseli-customSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
40.0000
66.6667
28.5714
89.7059
21250
0.0000
ciseli-customSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
85.0862
98.1976
75.0636
85.4109
147127147549097
19.7959
ciseli-customSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
78.3548
95.3881
66.4830
78.8960
13899672139987057339
4.8037
ciseli-customSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
71.8331
93.3976
58.3587
78.4954
85306038633616087
1.4123
ciseli-customSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
65.0000
86.6667
52.0000
85.0299
13213121
8.3333
ciseli-customSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
91.8329
98.7645
85.8105
79.7572
5356675352885251
28.3616
ciseli-customSNPtvlowcmp_SimpleRepeat_diTR_11to50*
81.1779
95.3254
70.6870
69.0825
462922746711937164
8.4667
ciseli-customSNPtvlowcmp_SimpleRepeat_diTR_11to50het
76.8078
93.2966
65.2719
67.9320
28812072917155248
3.0928
ciseli-customSNPtvlowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
0.0000
65.2174
01082
25.0000
ciseli-customSNPtvlowcmp_SimpleRepeat_diTR_11to50homalt
89.8551
98.9247
82.3088
71.2571
1748191754377114
30.2387
ciseli-customSNPtvlowcmp_SimpleRepeat_diTR_51to200*
15.2009
76.9231
8.4337
82.7562
206212284
1.7544
ciseli-customSNPtvlowcmp_SimpleRepeat_diTR_51to200het
11.7249
76.4706
6.3492
79.5676
134121772
1.1299
ciseli-customSNPtvlowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
0.0000
0.0000
00000
ciseli-customSNPtvlowcmp_SimpleRepeat_diTR_51to200homalt
25.1497
77.7778
15.0000
88.4393
729512
3.9216