PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
71801-71850 / 86044 show all
ciseli-customINDEL*map_l150_m1_e0het
66.7585
62.9240
71.0907
93.2928
538317541220129
58.6364
ciseli-customINDEL*map_l150_m1_e0hetalt
0.0000
4.7619
0.0000
0.0000
120000
ciseli-customINDEL*map_l150_m1_e0homalt
63.4966
53.8961
77.2586
91.1399
2492132487353
72.6027
ciseli-customINDEL*map_l150_m2_e0*
65.2883
59.0199
73.0465
93.1719
831577832307191
62.2150
ciseli-customINDEL*map_l150_m2_e0het
66.9093
62.8035
71.5895
93.6451
569337572227132
58.1498
ciseli-customINDEL*map_l150_m2_e0hetalt
0.0000
4.7619
0.0000
0.0000
120000
ciseli-customINDEL*map_l150_m2_e0homalt
63.4799
54.2620
76.4706
91.7215
2612202608059
73.7500
ciseli-customINDEL*map_l150_m2_e1*
65.3436
59.0688
73.1100
93.1469
850589851313195
62.3003
ciseli-customINDEL*map_l150_m2_e1het
67.0194
62.9870
71.6034
93.6172
582342585232136
58.6207
ciseli-customINDEL*map_l150_m2_e1hetalt
0.0000
4.3478
0.0000
0.0000
122000
ciseli-customINDEL*map_l150_m2_e1homalt
63.5484
54.2683
76.6571
91.7065
2672252668159
72.8395
ciseli-customINDEL*map_l250_m0_e0*
55.0520
51.2821
59.4203
98.6428
403841288
28.5714
ciseli-customINDEL*map_l250_m0_e0het
51.9039
49.0566
55.1020
98.7937
262727225
22.7273
ciseli-customINDEL*map_l250_m0_e0hetalt
0.0000
0.0000
0.0000
00000
ciseli-customINDEL*map_l250_m0_e0homalt
62.2222
56.0000
70.0000
98.0411
14111463
50.0000
ciseli-customINDEL*map_l250_m1_e0*
57.5139
51.1475
65.6904
97.4137
1561491578240
48.7805
ciseli-customINDEL*map_l250_m1_e0het
57.5615
54.7368
60.6936
97.5902
104861056832
47.0588
ciseli-customINDEL*map_l250_m1_e0hetalt
0.0000
0.0000
0.0000
06000
ciseli-customINDEL*map_l250_m1_e0homalt
59.4286
47.7064
78.7879
96.7977
525752148
57.1429
ciseli-customINDEL*map_l250_m2_e0*
57.9713
51.3595
66.5370
97.5315
1701611718644
51.1628
ciseli-customINDEL*map_l250_m2_e0het
58.1040
54.2857
62.5000
97.7123
114961156933
47.8261
ciseli-customINDEL*map_l250_m2_e0hetalt
0.0000
0.0000
0.0000
06000
ciseli-customINDEL*map_l250_m2_e0homalt
59.5745
48.6957
76.7123
96.9159
5659561711
64.7059
ciseli-customINDEL*map_l250_m2_e1*
57.7232
51.3514
65.9004
97.5500
1711621728944
49.4382
ciseli-customINDEL*map_l250_m2_e1het
57.5214
54.0284
61.4973
97.7292
114971157233
45.8333
ciseli-customINDEL*map_l250_m2_e1hetalt
0.0000
0.0000
0.0000
06000
ciseli-customINDEL*map_l250_m2_e1homalt
60.0000
49.1379
77.0270
96.9384
5759571711
64.7059
ciseli-customINDEL*map_siren*
74.2881
71.4035
77.4156
83.7506
52912119529615451017
65.8252
ciseli-customINDEL*map_sirenhet
76.8656
76.7303
77.0013
84.6311
3459104934821040630
60.5769
ciseli-customINDEL*map_sirenhetalt
0.0000
5.6680
0.0000
0.0000
14233000
ciseli-customINDEL*map_sirenhomalt
73.0250
68.4746
78.2234
81.7056
18188371814505387
76.6337
ciseli-customINDEL*segdup*
85.0497
84.0767
86.0456
94.6455
21494072152349240
68.7679
ciseli-customINDEL*segduphet
88.2244
88.4038
88.0457
95.3251
1296170131117890
50.5618
ciseli-customINDEL*segduphetalt
0.0000
6.9231
0.0000
0.0000
9121000
ciseli-customINDEL*segduphomalt
85.4420
87.9167
83.1028
93.1884
844116841171150
87.7193
ciseli-customINDEL*segdupwithalt*
100.0000
100.0000
100.0000
99.9973
10100
ciseli-customINDEL*segdupwithalthet
100.0000
100.0000
100.0000
99.9962
10100
ciseli-customINDEL*segdupwithalthetalt
0.0000
0.0000
0.0000
00000
ciseli-customINDEL*segdupwithalthomalt
0.0000
100.0000
00000
ciseli-customINDEL*tech_badpromoters*
58.7413
55.2632
62.6866
50.3704
4234422517
68.0000
ciseli-customINDEL*tech_badpromotershet
56.4103
56.4103
56.4103
50.6329
2217221710
58.8235
ciseli-customINDEL*tech_badpromotershetalt
0.0000
0.0000
0.0000
04000
ciseli-customINDEL*tech_badpromotershomalt
65.5738
60.6061
71.4286
50.0000
20132087
87.5000
ciseli-customINDELC16_PLUS**
0.0000
0.0000
22.6415
96.3872
00124115
36.5854
ciseli-customINDELC16_PLUS*het
0.0000
0.0000
22.2222
96.6543
00270
0.0000
ciseli-customINDELC16_PLUS*hetalt
0.0000
0.0000
0.0000
00000
ciseli-customINDELC16_PLUS*homalt
0.0000
0.0000
22.7273
96.3272
00103415
44.1176
ciseli-customINDELC16_PLUSHG002complexvar*
0.0000
0.0000
23.8095
92.5926
00103215
46.8750
ciseli-customINDELC16_PLUSHG002complexvarhet
0.0000
0.0000
28.5714
91.1392
00250
0.0000
ciseli-customINDELC16_PLUSHG002complexvarhetalt
0.0000
0.0000
0.0000
00000