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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1416 1417 1418 1419 1420 1421 1422 1423 1424 ... 1720 1721 » 70951-71000 / 86044 show all
ckim-dragen	SNP	ti	*	het	99.7466	99.9566	99.5375	22.8315	1281335	556	1281494	5955	318	5.3401
ckim-dragen	SNP	ti	*	hetalt	99.1507	99.8282	98.4823	48.3899	581	1	584	9	9	100.0000
ckim-dragen	SNP	ti	*	homalt	99.9710	99.9493	99.9928	15.7227	802631	407	802738	58	51	87.9310
ckim-dragen	SNP	ti	HG002complexvar	*	99.9317	99.9245	99.9389	17.8695	508052	384	508287	311	156	50.1608
ckim-dragen	SNP	ti	HG002complexvar	het	99.9189	99.9266	99.9111	17.5776	314535	231	314661	280	125	44.6429
ckim-dragen	SNP	ti	HG002complexvar	hetalt	99.7579	99.5169	100.0000	39.2442	206	1	209	0	0
ckim-dragen	SNP	ti	HG002complexvar	homalt	99.9527	99.9214	99.9840	18.3095	193311	152	193417	31	31	100.0000
ckim-dragen	SNP	ti	HG002compoundhet	*	99.7941	99.8055	99.7828	35.8899	17444	34	17457	38	18	47.3684
ckim-dragen	SNP	ti	HG002compoundhet	het	99.7319	99.7265	99.7373	40.1998	9479	26	9491	25	5	20.0000
ckim-dragen	SNP	ti	HG002compoundhet	hetalt	99.9136	99.8273	100.0000	21.5739	578	1	578	0	0
ckim-dragen	SNP	ti	HG002compoundhet	homalt	99.8648	99.9053	99.8243	30.4352	7387	7	7388	13	13	100.0000
ckim-dragen	SNP	ti	decoy	*		0.0000		100.0000	0	0	0	0	0
ckim-dragen	SNP	ti	decoy	het		0.0000		100.0000	0	0	0	0	0
ckim-dragen	SNP	ti	decoy	hetalt		0.0000		100.0000	0	0	0	0	0
ckim-dragen	SNP	ti	decoy	homalt		0.0000		100.0000	0	0	0	0	0
ckim-dragen	SNP	ti	func_cds	*	99.6097	99.9637	99.2582	28.1352	13782	5	13782	103	1	0.9709
ckim-dragen	SNP	ti	func_cds	het	99.3804	99.9647	98.8029	32.2466	8501	3	8501	103	1	0.9709
ckim-dragen	SNP	ti	func_cds	hetalt	100.0000	100.0000	100.0000	57.8947	8	0	8	0	0
ckim-dragen	SNP	ti	func_cds	homalt	99.9810	99.9621	100.0000	20.1424	5273	2	5273	0	0
ckim-dragen	SNP	ti	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	98.7329	97.9988	99.4780	65.5490	3183	65	3240	17	5	29.4118
ckim-dragen	SNP	ti	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	98.6398	98.0237	99.2636	68.7768	1984	40	2022	15	3	20.0000
ckim-dragen	SNP	ti	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt		0.0000		100.0000	0	0	0	0	0
ckim-dragen	SNP	ti	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	98.8879	97.9575	99.8361	58.2906	1199	25	1218	2	2	100.0000
ckim-dragen	SNP	ti	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
ckim-dragen	SNP	ti	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
ckim-dragen	SNP	ti	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt		0.0000		100.0000	0	0	0	0	0
ckim-dragen	SNP	ti	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
ckim-dragen	SNP	ti	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	99.7964	99.8426	99.7503	54.7629	27915	44	27963	70	23	32.8571
ckim-dragen	SNP	ti	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	99.7569	99.8600	99.6542	57.5039	17826	25	17865	62	15	24.1935
ckim-dragen	SNP	ti	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	90.9091	83.3333	100.0000	87.8049	5	1	5	0	0
ckim-dragen	SNP	ti	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	99.8713	99.8218	99.9208	48.8376	10084	18	10093	8	8	100.0000
ckim-dragen	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	98.9719	99.1684	98.7761	70.4653	30884	259	31073	385	49	12.7273
ckim-dragen	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	98.6551	99.1981	98.1180	73.7453	19422	157	19551	375	40	10.6667
ckim-dragen	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	96.2963	100.0000	92.8571	87.8261	12	0	13	1	1	100.0000
ckim-dragen	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	99.5178	99.1170	99.9219	62.2385	11450	102	11509	9	8	88.8889
ckim-dragen	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	*	98.8470	98.2089	99.4934	48.2524	2906	53	2946	15	4	26.6667
ckim-dragen	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	het	98.7983	98.3069	99.2946	51.3464	1800	31	1830	13	2	15.3846
ckim-dragen	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	hetalt		0.0000		100.0000	0	0	0	0	0
ckim-dragen	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	98.9274	98.0496	99.8211	42.1025	1106	22	1116	2	2	100.0000
ckim-dragen	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
ckim-dragen	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
ckim-dragen	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	hetalt		0.0000		100.0000	0	0	0	0	0
ciseli-custom	INDEL	D1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	1	0	0	0
ciseli-custom	INDEL	D1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt	66.6667	100.0000	50.0000	99.2218	2	0	2	2	1	50.0000
ciseli-custom	INDEL	D1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	79.4183	79.5592	79.2778	75.7467	51260	13170	51089	13354	8419	63.0448
ciseli-custom	INDEL	D1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	86.5017	92.8720	80.9492	77.3758	30866	2369	31282	7362	3006	40.8313
ciseli-custom	INDEL	D1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	0.0000	5.0237	0.0000	0.0000	467	8829	0	0	0
ciseli-custom	INDEL	D1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	83.2820	90.9950	76.7743	72.8145	19927	1972	19807	5992	5413	90.3371
ciseli-custom	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	63.2865	63.0325	63.5426	64.6177	19796	11610	19777	11347	6716	59.1875
ciseli-custom	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	75.6874	87.3937	66.7467	68.5588	12021	1734	12511	6233	2150	34.4938

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