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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1410 1411 1412 1413 1414 1415 1416 1417 1418 ... 1720 1721 » 70651-70700 / 86044 show all
ckim-dragen	SNP	*	HG002complexvar	*	99.9301	99.9223	99.9379	19.4552	753795	586	754278	469	236	50.3198
ckim-dragen	SNP	*	HG002complexvar	het	99.9146	99.9212	99.9081	19.1598	465130	367	465401	428	195	45.5607
ckim-dragen	SNP	*	HG002complexvar	hetalt	99.8384	99.6774	100.0000	39.2996	309	1	312	0	0
ckim-dragen	SNP	*	HG002complexvar	homalt	99.9551	99.9245	99.9858	19.8995	288356	218	288565	41	41	100.0000
ckim-dragen	SNP	*	HG002compoundhet	*	99.7929	99.7831	99.8027	41.5217	25766	56	25804	51	26	50.9804
ckim-dragen	SNP	*	HG002compoundhet	het	99.7322	99.6967	99.7677	46.4046	14135	43	14173	33	8	24.2424
ckim-dragen	SNP	*	HG002compoundhet	hetalt	99.8839	99.7680	100.0000	22.0308	860	2	860	0	0
ckim-dragen	SNP	*	HG002compoundhet	homalt	99.8656	99.8980	99.8332	35.0217	10771	11	10771	18	18	100.0000
ckim-dragen	SNP	*	decoy	*		0.0000		100.0000	0	0	0	0	0
ckim-dragen	SNP	*	decoy	het		0.0000		100.0000	0	0	0	0	0
ckim-dragen	SNP	*	decoy	hetalt		0.0000		100.0000	0	0	0	0	0
ckim-dragen	SNP	*	decoy	homalt		0.0000		100.0000	0	0	0	0	0
ckim-dragen	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	98.0870	99.1898	97.0085	80.9382	9059	74	9177	283	13	4.5936
ckim-dragen	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	96.9697	100.0000	94.1176	90.5556	15	0	16	1	1	100.0000
ckim-dragen	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	99.5758	99.3915	99.7609	70.9351	5390	33	5423	13	4	30.7692
ckim-dragen	SNP	tv	lowcmp_SimpleRepeat_diTR_11to50	*	99.7426	99.6705	99.8147	66.5588	4840	16	4849	9	8	88.8889
ckim-dragen	SNP	tv	lowcmp_SimpleRepeat_diTR_11to50	het	99.7412	99.7085	99.7738	68.8882	3079	9	3088	7	6	85.7143
ckim-dragen	SNP	tv	lowcmp_SimpleRepeat_diTR_11to50	hetalt	100.0000	100.0000	100.0000	95.2381	1	0	1	0	0
ckim-dragen	SNP	tv	lowcmp_SimpleRepeat_diTR_11to50	homalt	99.7450	99.6038	99.8865	61.3427	1760	7	1760	2	2	100.0000
ckim-dragen	SNP	tv	lowcmp_SimpleRepeat_diTR_51to200	*	86.2069	96.1538	78.1250	95.6224	25	1	25	7	0	0.0000
ckim-dragen	SNP	tv	lowcmp_SimpleRepeat_diTR_51to200	het	96.9697	94.1176	100.0000	97.0962	16	1	16	0	0
ckim-dragen	SNP	tv	lowcmp_SimpleRepeat_diTR_51to200	hetalt		0.0000		100.0000	0	0	0	0	0
ckim-dragen	SNP	tv	lowcmp_SimpleRepeat_diTR_51to200	homalt	72.0000	100.0000	56.2500	91.0112	9	0	9	7	0	0.0000
ckim-dragen	SNP	tv	lowcmp_SimpleRepeat_homopolymer_6to10	*	99.9175	99.9267	99.9084	60.9850	10903	8	10906	10	2	20.0000
ckim-dragen	SNP	tv	lowcmp_SimpleRepeat_homopolymer_6to10	het	99.8860	99.9003	99.8718	61.7413	7012	7	7013	9	1	11.1111
ckim-dragen	SNP	tv	lowcmp_SimpleRepeat_homopolymer_6to10	hetalt	100.0000	100.0000	100.0000	70.5882	5	0	5	0	0
ckim-dragen	SNP	tv	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	99.9743	99.9743	99.9743	59.5233	3886	1	3888	1	1	100.0000
ckim-dragen	SNP	tv	lowcmp_SimpleRepeat_homopolymer_gt10	*		0.0000		100.0000	0	0	0	0	0
ckim-dragen	SNP	tv	lowcmp_SimpleRepeat_homopolymer_gt10	het		0.0000		100.0000	0	0	0	0	0
ckim-dragen	SNP	tv	lowcmp_SimpleRepeat_homopolymer_gt10	hetalt		0.0000		100.0000	0	0	0	0	0
ckim-dragen	SNP	tv	lowcmp_SimpleRepeat_homopolymer_gt10	homalt		0.0000		100.0000	0	0	0	0	0
ckim-dragen	SNP	tv	lowcmp_SimpleRepeat_quadTR_11to50	*	99.8125	99.9061	99.7191	40.4113	7445	7	7455	21	2	9.5238
ckim-dragen	SNP	tv	lowcmp_SimpleRepeat_quadTR_11to50	het	99.7237	99.8934	99.5546	42.4719	4684	5	4694	21	2	9.5238
ckim-dragen	SNP	tv	lowcmp_SimpleRepeat_quadTR_11to50	hetalt	100.0000	100.0000	100.0000	66.6667	5	0	5	0	0
ckim-dragen	SNP	tv	lowcmp_SimpleRepeat_quadTR_11to50	homalt	99.9637	99.9275	100.0000	36.4245	2756	2	2756	0	0
ckim-dragen	SNP	tv	lowcmp_SimpleRepeat_quadTR_51to200	*	95.2381	95.2381	95.2381	89.9522	40	2	40	2	0	0.0000
ckim-dragen	SNP	tv	lowcmp_SimpleRepeat_quadTR_51to200	het	94.4444	94.4444	94.4444	89.0578	34	2	34	2	0	0.0000
ckim-dragen	SNP	tv	lowcmp_SimpleRepeat_quadTR_51to200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-dragen	SNP	tv	lowcmp_SimpleRepeat_quadTR_51to200	homalt	100.0000	100.0000	100.0000	93.2584	6	0	6	0	0
ckim-dragen	SNP	tv	lowcmp_SimpleRepeat_triTR_11to50	*	99.7253	99.7681	99.6824	38.1649	3442	8	3453	11	4	36.3636
ckim-dragen	SNP	tv	lowcmp_SimpleRepeat_triTR_11to50	het	99.6745	99.8597	99.4900	40.5130	2135	3	2146	11	4	36.3636
ckim-dragen	SNP	tv	lowcmp_SimpleRepeat_triTR_11to50	hetalt		0.0000		100.0000	0	1	0	0	0
ckim-dragen	SNP	tv	lowcmp_SimpleRepeat_triTR_11to50	homalt	99.8472	99.6949	100.0000	33.7893	1307	4	1307	0	0
ckim-dragen	SNP	tv	lowcmp_SimpleRepeat_triTR_51to200	*	100.0000	100.0000	100.0000	98.6111	1	0	1	0	0
ckim-dragen	SNP	tv	lowcmp_SimpleRepeat_triTR_51to200	het	100.0000	100.0000	100.0000	98.3333	1	0	1	0	0
ckim-dragen	SNP	tv	lowcmp_SimpleRepeat_triTR_51to200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-dragen	SNP	tv	lowcmp_SimpleRepeat_triTR_51to200	homalt		0.0000		100.0000	0	0	0	0	0
ckim-dragen	SNP	tv	map_l100_m0_e0	*	98.2217	98.8903	97.5621	72.7546	10961	123	10965	274	31	11.3139
ckim-dragen	SNP	tv	map_l100_m0_e0	het	97.5576	98.6846	96.4561	76.6502	7127	95	7131	262	21	8.0153
ckim-dragen	SNP	tv	map_l100_m0_e0	hetalt	100.0000	100.0000	100.0000	79.4872	16	0	16	0	0

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