PrecisionFDA
Truth Challenge
Engage and improve DNA test results with our community challenges
Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
| Entry | Type | Subtype | Subset | Genotype | F-score | Recall | Precision | Frac_NA | Truth TP | Truth FN | Query TP | Query FP | FP gt | % FP ma | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
69801-69850 / 86044 show all | |||||||||||||||
| ckim-dragen | INDEL | D16_PLUS | lowcmp_SimpleRepeat_triTR_gt200 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| ckim-dragen | INDEL | D16_PLUS | lowcmp_SimpleRepeat_triTR_gt200 | homalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| ckim-dragen | INDEL | D16_PLUS | map_l100_m0_e0 | * | 72.7273 | 85.7143 | 63.1579 | 96.7438 | 24 | 4 | 24 | 14 | 1 | 7.1429 | |
| ckim-dragen | INDEL | D16_PLUS | map_l100_m0_e0 | het | 74.6228 | 89.4737 | 64.0000 | 97.0449 | 17 | 2 | 16 | 9 | 1 | 11.1111 | |
| ckim-dragen | INDEL | D16_PLUS | map_l100_m0_e0 | hetalt | 85.7143 | 75.0000 | 100.0000 | 90.4762 | 3 | 1 | 4 | 0 | 0 | ||
| ckim-dragen | INDEL | D16_PLUS | map_l100_m0_e0 | homalt | 57.1429 | 80.0000 | 44.4444 | 96.7742 | 4 | 1 | 4 | 5 | 0 | 0.0000 | |
| ckim-dragen | INDEL | D16_PLUS | map_l100_m1_e0 | * | 82.7225 | 90.8046 | 75.9615 | 95.2140 | 79 | 8 | 79 | 25 | 4 | 16.0000 | |
| ckim-dragen | INDEL | D16_PLUS | map_l100_m1_e0 | het | 80.0532 | 93.4783 | 70.0000 | 96.1710 | 43 | 3 | 42 | 18 | 2 | 11.1111 | |
| ckim-dragen | INDEL | D16_PLUS | map_l100_m1_e0 | hetalt | 91.6667 | 84.6154 | 100.0000 | 76.7677 | 22 | 4 | 23 | 0 | 0 | ||
| ckim-dragen | INDEL | D16_PLUS | map_l100_m1_e0 | homalt | 77.7778 | 93.3333 | 66.6667 | 95.8580 | 14 | 1 | 14 | 7 | 2 | 28.5714 | |
| ckim-dragen | INDEL | D16_PLUS | map_l100_m2_e0 | * | 82.4121 | 91.1111 | 75.2294 | 95.6746 | 82 | 8 | 82 | 27 | 4 | 14.8148 | |
| ckim-dragen | INDEL | D16_PLUS | map_l100_m2_e0 | het | 78.9957 | 93.7500 | 68.2540 | 96.5385 | 45 | 3 | 43 | 20 | 2 | 10.0000 | |
| ckim-dragen | INDEL | D16_PLUS | map_l100_m2_e0 | hetalt | 91.6667 | 84.6154 | 100.0000 | 77.5701 | 22 | 4 | 24 | 0 | 0 | ||
| ckim-dragen | INDEL | D16_PLUS | map_l100_m2_e0 | homalt | 78.9474 | 93.7500 | 68.1818 | 96.2901 | 15 | 1 | 15 | 7 | 2 | 28.5714 | |
| ckim-dragen | INDEL | D16_PLUS | map_l100_m2_e1 | * | 82.6291 | 90.7216 | 75.8621 | 95.5021 | 88 | 9 | 88 | 28 | 5 | 17.8571 | |
| ckim-dragen | INDEL | D16_PLUS | map_l100_m2_e1 | het | 79.3959 | 94.1176 | 68.6567 | 96.4037 | 48 | 3 | 46 | 21 | 3 | 14.2857 | |
| ckim-dragen | INDEL | D16_PLUS | map_l100_m2_e1 | hetalt | 90.9091 | 83.3333 | 100.0000 | 76.9231 | 25 | 5 | 27 | 0 | 0 | ||
| ckim-dragen | INDEL | D16_PLUS | map_l100_m2_e1 | homalt | 78.9474 | 93.7500 | 68.1818 | 96.3272 | 15 | 1 | 15 | 7 | 2 | 28.5714 | |
| ckim-dragen | INDEL | D16_PLUS | map_l125_m0_e0 | * | 76.9231 | 83.3333 | 71.4286 | 97.7671 | 10 | 2 | 10 | 4 | 1 | 25.0000 | |
| ckim-dragen | INDEL | D16_PLUS | map_l125_m0_e0 | het | 76.1905 | 88.8889 | 66.6667 | 97.4414 | 8 | 1 | 8 | 4 | 1 | 25.0000 | |
| ckim-dragen | INDEL | D16_PLUS | map_l125_m0_e0 | hetalt | 0.0000 | 100.0000 | 0 | 1 | 0 | 0 | 0 | ||||
| ckim-dragen | INDEL | D16_PLUS | map_l125_m0_e0 | homalt | 100.0000 | 100.0000 | 100.0000 | 98.5612 | 2 | 0 | 2 | 0 | 0 | ||
| ckim-dragen | INDEL | D16_PLUS | map_l125_m1_e0 | * | 86.2069 | 92.5926 | 80.6452 | 97.3436 | 25 | 2 | 25 | 6 | 1 | 16.6667 | |
| ckim-dragen | INDEL | D16_PLUS | map_l125_m1_e0 | het | 86.3636 | 95.0000 | 79.1667 | 97.2603 | 19 | 1 | 19 | 5 | 1 | 20.0000 | |
| ckim-dragen | INDEL | D16_PLUS | map_l125_m1_e0 | hetalt | 80.0000 | 66.6667 | 100.0000 | 94.2857 | 2 | 1 | 2 | 0 | 0 | ||
| ckim-dragen | INDEL | D16_PLUS | map_l125_m1_e0 | homalt | 88.8889 | 100.0000 | 80.0000 | 98.0469 | 4 | 0 | 4 | 1 | 0 | 0.0000 | |
| ckim-dragen | INDEL | D16_PLUS | map_l125_m2_e0 | * | 83.3333 | 92.5926 | 75.7576 | 97.6035 | 25 | 2 | 25 | 8 | 1 | 12.5000 | |
| ckim-dragen | INDEL | D16_PLUS | map_l125_m2_e0 | het | 84.4444 | 95.0000 | 76.0000 | 97.5822 | 19 | 1 | 19 | 6 | 1 | 16.6667 | |
| ckim-dragen | INDEL | D16_PLUS | map_l125_m2_e0 | hetalt | 80.0000 | 66.6667 | 100.0000 | 94.5946 | 2 | 1 | 2 | 0 | 0 | ||
| ckim-dragen | INDEL | D16_PLUS | map_l125_m2_e0 | homalt | 80.0000 | 100.0000 | 66.6667 | 98.0392 | 4 | 0 | 4 | 2 | 0 | 0.0000 | |
| ckim-dragen | INDEL | D16_PLUS | map_l125_m2_e1 | * | 80.6452 | 89.2857 | 73.5294 | 97.5887 | 25 | 3 | 25 | 9 | 2 | 22.2222 | |
| ckim-dragen | INDEL | D16_PLUS | map_l125_m2_e1 | het | 82.6087 | 95.0000 | 73.0769 | 97.5495 | 19 | 1 | 19 | 7 | 2 | 28.5714 | |
| ckim-dragen | INDEL | D16_PLUS | map_l125_m2_e1 | hetalt | 66.6667 | 50.0000 | 100.0000 | 94.7368 | 2 | 2 | 2 | 0 | 0 | ||
| ckim-dragen | INDEL | D16_PLUS | map_l125_m2_e1 | homalt | 80.0000 | 100.0000 | 66.6667 | 98.0707 | 4 | 0 | 4 | 2 | 0 | 0.0000 | |
| ckim-dragen | INDEL | D16_PLUS | map_l150_m0_e0 | * | 82.3529 | 100.0000 | 70.0000 | 97.6581 | 7 | 0 | 7 | 3 | 0 | 0.0000 | |
| ckim-dragen | INDEL | D16_PLUS | map_l150_m0_e0 | het | 82.3529 | 100.0000 | 70.0000 | 96.8944 | 7 | 0 | 7 | 3 | 0 | 0.0000 | |
| ckim-dragen | INDEL | D16_PLUS | map_l150_m0_e0 | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| ckim-dragen | INDEL | D16_PLUS | map_l150_m0_e0 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| ckim-dragen | INDEL | D16_PLUS | map_l150_m1_e0 | * | 81.2500 | 86.6667 | 76.4706 | 97.8399 | 13 | 2 | 13 | 4 | 1 | 25.0000 | |
| ckim-dragen | INDEL | D16_PLUS | map_l150_m1_e0 | het | 83.8710 | 92.8571 | 76.4706 | 97.2039 | 13 | 1 | 13 | 4 | 1 | 25.0000 | |
| ckim-dragen | INDEL | D16_PLUS | map_l150_m1_e0 | hetalt | 0.0000 | 100.0000 | 0 | 1 | 0 | 0 | 0 | ||||
| ckim-dragen | INDEL | D16_PLUS | map_l150_m1_e0 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| ckim-dragen | INDEL | D16_PLUS | map_l150_m2_e0 | * | 81.0811 | 88.2353 | 75.0000 | 97.9079 | 15 | 2 | 15 | 5 | 1 | 20.0000 | |
| ckim-dragen | INDEL | D16_PLUS | map_l150_m2_e0 | het | 83.3333 | 93.7500 | 75.0000 | 97.2752 | 15 | 1 | 15 | 5 | 1 | 20.0000 | |
| ckim-dragen | INDEL | D16_PLUS | map_l150_m2_e0 | hetalt | 0.0000 | 100.0000 | 0 | 1 | 0 | 0 | 0 | ||||
| ckim-dragen | INDEL | D16_PLUS | map_l150_m2_e0 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| ckim-dragen | INDEL | D16_PLUS | map_l150_m2_e1 | * | 76.9231 | 83.3333 | 71.4286 | 97.8373 | 15 | 3 | 15 | 6 | 2 | 33.3333 | |
| ckim-dragen | INDEL | D16_PLUS | map_l150_m2_e1 | het | 81.0811 | 93.7500 | 71.4286 | 97.1812 | 15 | 1 | 15 | 6 | 2 | 33.3333 | |
| ckim-dragen | INDEL | D16_PLUS | map_l150_m2_e1 | hetalt | 0.0000 | 100.0000 | 0 | 2 | 0 | 0 | 0 | ||||
| ckim-dragen | INDEL | D16_PLUS | map_l150_m2_e1 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||