PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
66451-66500 / 86044 show all
ckim-gatkINDEL*map_l250_m0_e0*
84.7458
96.1538
75.7576
98.3736
75375242
8.3333
ckim-gatkINDEL*map_l250_m0_e0het
80.3150
96.2264
68.9189
98.4901
51251231
4.3478
ckim-gatkINDEL*map_l250_m0_e0hetalt
0.0000
100.0000
00000
ckim-gatkINDEL*map_l250_m0_e0homalt
96.0000
96.0000
96.0000
97.7085
2412411
100.0000
ckim-gatkINDEL*map_l250_m1_e0*
91.9255
97.0492
87.3156
97.0758
2969296434
9.3023
ckim-gatkINDEL*map_l250_m1_e0het
88.9423
97.3684
81.8584
97.5127
1855185412
4.8781
ckim-gatkINDEL*map_l250_m1_e0hetalt
80.0000
66.6667
100.0000
98.1308
42400
ckim-gatkINDEL*map_l250_m1_e0homalt
98.1651
98.1651
98.1651
95.2464
107210722
100.0000
ckim-gatkINDEL*map_l250_m2_e0*
92.5287
97.2810
88.2192
97.2498
3229322434
9.3023
ckim-gatkINDEL*map_l250_m2_e0het
89.9123
97.6190
83.3333
97.6273
2055205412
4.8781
ckim-gatkINDEL*map_l250_m2_e0hetalt
80.0000
66.6667
100.0000
98.4496
42400
ckim-gatkINDEL*map_l250_m2_e0homalt
98.2609
98.2609
98.2609
95.6538
113211322
100.0000
ckim-gatkINDEL*map_l250_m2_e1*
92.5714
97.2973
88.2834
97.3082
3249324434
9.3023
ckim-gatkINDEL*map_l250_m2_e1het
89.9563
97.6303
83.4008
97.6831
2065206412
4.8781
ckim-gatkINDEL*map_l250_m2_e1hetalt
80.0000
66.6667
100.0000
98.4791
42400
ckim-gatkINDEL*map_l250_m2_e1homalt
98.2759
98.2759
98.2759
95.7196
114211422
100.0000
ckim-gatkINDEL*map_siren*
98.0865
98.7854
97.3974
85.2125
732090733519624
12.2449
ckim-gatkINDEL*map_sirenhet
97.5443
99.0018
96.1290
86.6172
446345447018015
8.3333
ckim-gatkINDEL*map_sirenhetalt
94.4444
89.4737
100.0000
86.4930
2212622300
ckim-gatkINDEL*map_sirenhomalt
99.3412
99.2844
99.3980
81.7081
2636192642169
56.2500
ckim-gatkINDEL*segdup*
97.7045
99.0219
96.4218
95.7792
25312525339410
10.6383
ckim-gatkINDEL*segduphet
96.8043
99.1814
94.5384
96.5594
1454121454841
1.1905
ckim-gatkINDEL*segduphetalt
95.5823
91.5385
100.0000
94.4622
1191112100
ckim-gatkINDEL*segduphomalt
99.3776
99.7917
98.9669
93.6950
9582958109
90.0000
ckim-gatkINDEL*segdupwithalt*
100.0000
100.0000
100.0000
99.9981
10100
ckim-gatkINDEL*segdupwithalthet
100.0000
100.0000
100.0000
99.9975
10100
ckim-gatkINDEL*segdupwithalthetalt
0.0000
100.0000
00000
ckim-gatkINDEL*segdupwithalthomalt
0.0000
100.0000
00000
ckim-gatkINDEL*tech_badpromoters*
99.3377
98.6842
100.0000
54.8193
7517500
ckim-gatkINDEL*tech_badpromotershet
98.7013
97.4359
100.0000
53.0864
3813800
ckim-gatkINDEL*tech_badpromotershetalt
100.0000
100.0000
100.0000
50.0000
40400
ckim-gatkINDEL*tech_badpromotershomalt
100.0000
100.0000
100.0000
57.1429
3303300
ckim-gatkINDELC16_PLUS**
0.0000
0.0000
0.0000
00000
ckim-gatkINDELC16_PLUS*het
0.0000
0.0000
0.0000
00000
ckim-gatkINDELC16_PLUS*hetalt
0.0000
0.0000
0.0000
00000
ckim-gatkINDELC16_PLUS*homalt
0.0000
0.0000
0.0000
00000
ckim-gatkINDELC16_PLUSHG002complexvar*
0.0000
0.0000
0.0000
00000
ckim-gatkINDELC16_PLUSHG002complexvarhet
0.0000
0.0000
0.0000
00000
ckim-gatkINDELC16_PLUSHG002complexvarhetalt
0.0000
0.0000
0.0000
00000
ckim-gatkINDELC16_PLUSHG002complexvarhomalt
0.0000
0.0000
0.0000
00000
ckim-gatkINDELC16_PLUSHG002compoundhet*
0.0000
0.0000
0.0000
00000
ckim-gatkINDELC16_PLUSHG002compoundhethet
0.0000
0.0000
0.0000
00000
ckim-gatkINDELC16_PLUSHG002compoundhethetalt
0.0000
0.0000
0.0000
00000
ckim-gatkINDELC16_PLUSHG002compoundhethomalt
0.0000
0.0000
0.0000
00000
ckim-gatkINDELC16_PLUSdecoy*
0.0000
0.0000
0.0000
00000
ckim-gatkINDELC16_PLUSdecoyhet
0.0000
0.0000
0.0000
00000
ckim-gatkINDELC16_PLUSdecoyhetalt
0.0000
0.0000
0.0000
00000
ckim-gatkINDELC16_PLUSdecoyhomalt
0.0000
0.0000
0.0000
00000
ckim-gatkINDELC16_PLUSfunc_cds*
0.0000
0.0000
0.0000
00000
ckim-gatkINDELC16_PLUSfunc_cdshet
0.0000
0.0000
0.0000
00000