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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1271 1272 1273 1274 1275 1276 1277 1278 1279 ... 1720 1721 » 63701-63750 / 86044 show all
ckim-isaac	INDEL	I1_5	segdup	*	97.2169	95.6563	98.8293	93.2182	1013	46	1013	12	8	66.6667
ckim-isaac	INDEL	I1_5	segdup	het	97.7612	97.3978	98.1273	94.4800	524	14	524	10	6	60.0000
ckim-isaac	INDEL	I1_5	segdup	hetalt	92.1348	85.4167	100.0000	94.7165	41	7	41	0	0
ckim-isaac	INDEL	I1_5	segdup	homalt	97.0748	94.7146	99.5556	90.3516	448	25	448	2	2	100.0000
ckim-isaac	INDEL	I1_5	segdupwithalt	*		0.0000		100.0000	0	0	0	0	0
ckim-isaac	INDEL	I1_5	segdupwithalt	het		0.0000		100.0000	0	0	0	0	0
ckim-isaac	INDEL	I1_5	segdupwithalt	hetalt		0.0000		100.0000	0	0	0	0	0
ckim-isaac	INDEL	I1_5	segdupwithalt	homalt		0.0000		100.0000	0	0	0	0	0
ckim-isaac	INDEL	I1_5	tech_badpromoters	*	95.2381	90.9091	100.0000	51.2195	20	2	20	0	0
ckim-isaac	INDEL	I1_5	tech_badpromoters	het	100.0000	100.0000	100.0000	46.6667	8	0	8	0	0
ckim-isaac	INDEL	I1_5	tech_badpromoters	hetalt	100.0000	100.0000	100.0000	50.0000	1	0	1	0	0
ckim-isaac	INDEL	I1_5	tech_badpromoters	homalt	91.6667	84.6154	100.0000	54.1667	11	2	11	0	0
ckim-isaac	INDEL	I6_15	*	*	86.2978	78.9268	95.1875	41.9911	19592	5231	19601	991	727	73.3602
ckim-isaac	INDEL	I6_15	*	het	88.7567	85.9065	91.8024	48.2080	8619	1414	8623	770	554	71.9481
ckim-isaac	INDEL	I6_15	*	hetalt	81.9509	69.9567	98.9089	28.8855	5982	2569	5983	66	52	78.7879
ckim-isaac	INDEL	I6_15	*	homalt	87.6777	79.9968	96.9903	41.8473	4991	1248	4995	155	121	78.0645
ckim-isaac	INDEL	I6_15	HG002complexvar	*	77.4674	68.9900	88.3200	51.9231	3306	1486	3312	438	187	42.6941
ckim-isaac	INDEL	I6_15	HG002complexvar	het	79.6121	75.4140	84.3052	55.5219	1776	579	1735	323	120	37.1517
ckim-isaac	INDEL	I6_15	HG002complexvar	hetalt	70.4127	56.1733	94.3226	46.2179	687	536	731	44	30	68.1818
ckim-isaac	INDEL	I6_15	HG002complexvar	homalt	79.2387	69.4399	92.2574	47.0554	843	371	846	71	37	52.1127
ckim-isaac	INDEL	I6_15	HG002compoundhet	*	78.6319	69.8154	89.9971	31.6672	6127	2649	6127	681	634	93.0984
ckim-isaac	INDEL	I6_15	HG002compoundhet	het	32.8633	69.2308	21.5453	64.8197	144	64	145	528	493	93.3712
ckim-isaac	INDEL	I6_15	HG002compoundhet	hetalt	82.1207	69.9426	99.4336	21.1377	5971	2566	5969	34	23	67.6471
ckim-isaac	INDEL	I6_15	HG002compoundhet	homalt	15.7021	38.7097	9.8485	69.8630	12	19	13	119	118	99.1597
ckim-isaac	INDEL	I6_15	decoy	*		0.0000		100.0000	0	0	0	0	0
ckim-isaac	INDEL	I6_15	decoy	het		0.0000		100.0000	0	0	0	0	0
ckim-isaac	INDEL	I6_15	decoy	hetalt		0.0000		100.0000	0	0	0	0	0
ckim-isaac	INDEL	I6_15	decoy	homalt		0.0000		100.0000	0	0	0	0	0
ckim-isaac	INDEL	I6_15	func_cds	*	91.1392	83.7209	100.0000	33.3333	36	7	36	0	0
ckim-isaac	INDEL	I6_15	func_cds	het	93.3333	87.5000	100.0000	34.3750	21	3	21	0	0
ckim-isaac	INDEL	I6_15	func_cds	hetalt	66.6667	50.0000	100.0000	33.3333	2	2	2	0	0
ckim-isaac	INDEL	I6_15	func_cds	homalt	92.8571	86.6667	100.0000	31.5789	13	2	13	0	0
ckim-isaac	INDEL	I6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	71.9593	58.1340	94.4123	59.6109	486	350	490	29	18	62.0690
ckim-isaac	INDEL	I6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	75.9096	68.0162	85.8757	72.5581	168	79	152	25	16	64.0000
ckim-isaac	INDEL	I6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	67.3433	50.9434	99.3151	42.0635	270	260	290	2	1	50.0000
ckim-isaac	INDEL	I6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	88.0734	81.3559	96.0000	63.2353	48	11	48	2	1	50.0000
ckim-isaac	INDEL	I6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
ckim-isaac	INDEL	I6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
ckim-isaac	INDEL	I6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt		0.0000		100.0000	0	0	0	0	0
ckim-isaac	INDEL	I6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
ckim-isaac	INDEL	I6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	84.4285	76.5337	94.1394	56.8627	4067	1247	4080	254	153	60.2362
ckim-isaac	INDEL	I6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	84.6555	81.5055	88.0587	71.2392	1256	285	1261	171	87	50.8772
ckim-isaac	INDEL	I6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	84.1772	73.3974	98.6684	34.6801	2290	830	2297	31	21	67.7419
ckim-isaac	INDEL	I6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	84.9987	79.7856	90.9408	61.8351	521	132	522	52	45	86.5385
ckim-isaac	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	82.0986	72.9041	93.9468	53.8786	4609	1713	4625	298	190	63.7584
ckim-isaac	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	81.8319	77.0675	87.2242	66.9862	1519	452	1502	220	128	58.1818
ckim-isaac	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	81.7466	69.7674	98.6920	34.2284	2460	1066	2490	33	24	72.7273
ckim-isaac	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	84.0119	76.3636	93.3628	58.1998	630	195	633	45	38	84.4444
ckim-isaac	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	*	82.3899	73.5955	93.5714	59.8854	131	47	131	9	3	33.3333
ckim-isaac	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	het	81.5179	74.0741	90.6250	67.6768	60	21	58	6	2	33.3333

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