PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
60551-60600 / 86044 show all
dgrover-gatkSNP*map_l100_m1_e0hetalt
98.7654
97.5610
100.0000
71.2230
4014000
dgrover-gatkSNP*map_l100_m1_e0homalt
99.7105
99.5001
99.9219
58.2002
26868135268682116
76.1905
dgrover-gatkSNP*map_l100_m2_e0*
99.4963
99.4795
99.5130
68.3628
735793857356836079
21.9444
dgrover-gatkSNP*map_l100_m2_e0het
99.3701
99.4698
99.2707
71.6313
461532464614233963
18.5841
dgrover-gatkSNP*map_l100_m2_e0hetalt
98.7952
97.6190
100.0000
73.7179
4114100
dgrover-gatkSNP*map_l100_m2_e0homalt
99.7105
99.4986
99.9234
60.6643
27385138273852116
76.1905
dgrover-gatkSNP*map_l100_m2_e1*
99.4995
99.4835
99.5154
68.3658
743513867434036279
21.8232
dgrover-gatkSNP*map_l100_m2_e1het
99.3747
99.4755
99.2742
71.6392
466522464664134163
18.4751
dgrover-gatkSNP*map_l100_m2_e1hetalt
98.8235
97.6744
100.0000
73.2484
4214200
dgrover-gatkSNP*map_l100_m2_e1homalt
99.7116
99.4999
99.9241
60.6444
27657139276572116
76.1905
dgrover-gatkSNP*map_l125_m0_e0*
98.9327
98.9889
98.8765
77.4655
191891961918621848
22.0183
dgrover-gatkSNP*map_l125_m0_e0het
98.7051
99.0287
98.3836
80.4812
125411231253820640
19.4175
dgrover-gatkSNP*map_l125_m0_e0hetalt
100.0000
100.0000
100.0000
77.5000
90900
dgrover-gatkSNP*map_l125_m0_e0homalt
99.3639
98.9124
99.8196
67.9886
6639736639128
66.6667
dgrover-gatkSNP*map_l125_m1_e0*
99.3215
99.3139
99.3291
72.7346
450163114501030468
22.3684
dgrover-gatkSNP*map_l125_m1_e0het
99.1524
99.3097
98.9956
76.1623
281961962819028655
19.2308
dgrover-gatkSNP*map_l125_m1_e0hetalt
98.3051
96.6667
100.0000
72.3810
2912900
dgrover-gatkSNP*map_l125_m1_e0homalt
99.6085
99.3256
99.8929
63.9547
16791114167911813
72.2222
dgrover-gatkSNP*map_l125_m2_e0*
99.3279
99.3194
99.3363
74.2156
464053184639931069
22.2581
dgrover-gatkSNP*map_l125_m2_e0het
99.1639
99.3212
99.0070
77.2838
291191992911329256
19.1781
dgrover-gatkSNP*map_l125_m2_e0hetalt
98.3051
96.6667
100.0000
77.1654
2912900
dgrover-gatkSNP*map_l125_m2_e0homalt
99.6075
99.3209
99.8958
66.5083
17257118172571813
72.2222
dgrover-gatkSNP*map_l125_m2_e1*
99.3336
99.3263
99.3409
74.2508
468843184687831169
22.1865
dgrover-gatkSNP*map_l125_m2_e1het
99.1713
99.3286
99.0144
77.3174
294411992943529356
19.1126
dgrover-gatkSNP*map_l125_m2_e1hetalt
98.3051
96.6667
100.0000
77.1654
2912900
dgrover-gatkSNP*map_l125_m2_e1homalt
99.6110
99.3269
99.8967
66.5258
17414118174141813
72.2222
dgrover-gatkSNP*map_l150_m0_e0*
98.7537
98.7949
98.7125
82.2666
118871451188415529
18.7097
dgrover-gatkSNP*map_l150_m0_e0het
98.4616
98.7657
98.1593
84.6929
784298783914723
15.6463
dgrover-gatkSNP*map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
90.3226
30300
dgrover-gatkSNP*map_l150_m0_e0homalt
99.3242
98.8506
99.8025
74.1808
404247404286
75.0000
dgrover-gatkSNP*map_l150_m1_e0*
99.1521
99.1473
99.1569
77.1188
303482613034225859
22.8682
dgrover-gatkSNP*map_l150_m1_e0het
98.9459
99.1510
98.7416
80.1493
191521641914624449
20.0820
dgrover-gatkSNP*map_l150_m1_e0hetalt
97.4359
95.0000
100.0000
76.8293
1911900
dgrover-gatkSNP*map_l150_m1_e0homalt
99.5103
99.1484
99.8749
68.8906
1117796111771410
71.4286
dgrover-gatkSNP*map_l150_m2_e0*
99.1679
99.1680
99.1679
78.4218
315872653158126560
22.6415
dgrover-gatkSNP*map_l150_m2_e0het
98.9689
99.1805
98.7582
81.1353
199681651996225150
19.9203
dgrover-gatkSNP*map_l150_m2_e0hetalt
97.4359
95.0000
100.0000
80.8081
1911900
dgrover-gatkSNP*map_l150_m2_e0homalt
99.5153
99.1538
99.8795
71.2083
1160099116001410
71.4286
dgrover-gatkSNP*map_l150_m2_e1*
99.1741
99.1773
99.1710
78.4616
319452653193926760
22.4719
dgrover-gatkSNP*map_l150_m2_e1het
98.9757
99.1897
98.7625
81.1801
201981652019225350
19.7628
dgrover-gatkSNP*map_l150_m2_e1hetalt
97.4359
95.0000
100.0000
80.8081
1911900
dgrover-gatkSNP*map_l150_m2_e1homalt
99.5206
99.1629
99.8808
71.2164
1172899117281410
71.4286
dgrover-gatkSNP*map_l250_m0_e0*
97.6090
97.5176
97.7006
93.8613
20825320824910
20.4082
dgrover-gatkSNP*map_l250_m0_e0het
97.2149
97.3440
97.0861
94.4551
1466401466447
15.9091
dgrover-gatkSNP*map_l250_m0_e0hetalt
0.0000
100.0000
00000
dgrover-gatkSNP*map_l250_m0_e0homalt
98.5600
97.9332
99.1948
91.6845
6161361653
60.0000
dgrover-gatkSNP*map_l250_m1_e0*
98.3434
98.2276
98.4594
89.8378
7094128709411129
26.1261
dgrover-gatkSNP*map_l250_m1_e0het
98.0059
98.1914
97.8211
91.1588
466986466910424
23.0769
dgrover-gatkSNP*map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
90.6977
40400
dgrover-gatkSNP*map_l250_m1_e0homalt
98.9982
98.2948
99.7117
85.6084
242142242175
71.4286