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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1203 1204 1205 1206 1207 1208 1209 1210 1211 ... 1720 1721 » 60301-60350 / 86044 show all
dgrover-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	*	100.0000	100.0000	100.0000	99.8599	1	0	1	0	0
dgrover-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
dgrover-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	96.7742	1	0	1	0	0
dgrover-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
dgrover-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	*	99.5960	99.4864	99.7059	77.5541	1356	7	1356	4	2	50.0000
dgrover-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	99.6764	99.6119	99.7409	78.6681	770	3	770	2	0	0.0000
dgrover-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	hetalt	98.1818	96.4286	100.0000	75.2860	108	4	108	0	0
dgrover-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	99.7912	100.0000	99.5833	76.0359	478	0	478	2	2	100.0000
dgrover-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	99.7906	99.7906	99.7906	80.5736	953	2	953	2	1	50.0000
dgrover-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	het	99.8179	99.8179	99.8179	81.2244	548	1	548	1	0	0.0000
dgrover-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	hetalt	99.1597	98.3333	100.0000	81.5047	59	1	59	0	0
dgrover-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	99.8557	100.0000	99.7118	79.2588	346	0	346	1	1	100.0000
dgrover-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	*	93.5818	90.2196	97.2043	65.2466	904	98	904	26	23	88.4615
dgrover-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	het	95.9826	96.1806	95.7854	80.6810	277	11	250	11	8	72.7273
dgrover-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	hetalt	92.9721	86.8671	100.0000	38.2637	549	83	576	0	0
dgrover-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	89.1429	95.1220	83.8710	76.2755	78	4	78	15	15	100.0000
dgrover-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
dgrover-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
dgrover-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	hetalt		0.0000		100.0000	0	0	0	0	0
dgrover-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
dgrover-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	*	97.4797	95.7302	99.2944	52.9989	6614	295	6614	47	42	89.3617
dgrover-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	98.7710	98.6981	98.8439	73.8011	1592	21	1539	18	13	72.2222
dgrover-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	97.0210	94.2544	99.9549	27.4378	4380	267	4433	2	2	100.0000
dgrover-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt	97.4203	98.9214	95.9641	68.3987	642	7	642	27	27	100.0000
dgrover-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	*	98.1090	96.6453	99.6177	51.2288	5733	199	5733	22	20	90.9091
dgrover-gatk	INDEL	D16_PLUS	map_siren	hetalt	94.9153	90.3226	100.0000	82.6590	28	3	30	0	0
dgrover-gatk	INDEL	D16_PLUS	map_siren	homalt	91.6667	97.0588	86.8421	94.1267	33	1	33	5	0	0.0000
dgrover-gatk	INDEL	D16_PLUS	segdup	*	92.5620	96.5517	88.8889	96.4467	56	2	56	7	2	28.5714
dgrover-gatk	INDEL	D16_PLUS	segdup	het	90.9091	100.0000	83.3333	96.7033	37	0	35	7	2	28.5714
dgrover-gatk	INDEL	D16_PLUS	segdup	hetalt	87.5000	77.7778	100.0000	93.1818	7	2	9	0	0
dgrover-gatk	INDEL	D16_PLUS	segdup	homalt	100.0000	100.0000	100.0000	96.7302	12	0	12	0	0
dgrover-gatk	INDEL	D16_PLUS	segdupwithalt	*		0.0000		100.0000	0	0	0	0	0
dgrover-gatk	INDEL	D16_PLUS	segdupwithalt	het		0.0000		100.0000	0	0	0	0	0
dgrover-gatk	INDEL	D16_PLUS	segdupwithalt	hetalt		0.0000		100.0000	0	0	0	0	0
dgrover-gatk	INDEL	D16_PLUS	segdupwithalt	homalt		0.0000		100.0000	0	0	0	0	0
dgrover-gatk	INDEL	D16_PLUS	tech_badpromoters	*	100.0000	100.0000	100.0000	42.8571	4	0	4	0	0
dgrover-gatk	INDEL	D16_PLUS	tech_badpromoters	het	100.0000	100.0000	100.0000	0.0000	4	0	4	0	0
dgrover-gatk	INDEL	D16_PLUS	tech_badpromoters	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
dgrover-gatk	INDEL	D16_PLUS	tech_badpromoters	homalt		0.0000		100.0000	0	0	0	0	0
dgrover-gatk	INDEL	D1_5	*	*	99.6144	99.5271	99.7018	60.8244	146051	694	146107	437	317	72.5400
dgrover-gatk	INDEL	D1_5	*	het	99.7614	99.7979	99.7250	59.4296	87397	177	87406	241	125	51.8672
dgrover-gatk	INDEL	D1_5	*	hetalt	97.3217	95.1977	99.5427	63.5299	9753	492	9795	45	43	95.5556
dgrover-gatk	INDEL	D1_5	*	homalt	99.8204	99.9489	99.6922	62.5668	48901	25	48906	151	149	98.6755
dgrover-gatk	INDEL	D1_5	HG002complexvar	*	99.6498	99.5323	99.7675	58.6672	32562	153	32617	76	66	86.8421
dgrover-gatk	INDEL	D1_5	HG002complexvar	het	99.8048	99.6966	99.9132	56.2931	20702	63	20710	18	11	61.1111
dgrover-gatk	INDEL	D1_5	HG002complexvar	hetalt	95.3242	93.9349	96.7552	73.1272	1270	82	1312	44	43	97.7273
dgrover-gatk	INDEL	D1_5	HG002complexvar	homalt	99.8963	99.9245	99.8680	60.1555	10590	8	10595	14	12	85.7143
dgrover-gatk	INDEL	D1_5	HG002compoundhet	*	96.6517	95.7826	97.5368	66.6083	11719	516	11721	296	293	98.9865
dgrover-gatk	INDEL	D1_5	HG002compoundhet	het	96.0763	98.4375	93.8258	79.0071	1701	27	1702	112	111	99.1071
dgrover-gatk	INDEL	D1_5	HG002compoundhet	hetalt	97.3579	95.2232	99.5905	58.8743	9728	488	9729	40	39	97.5000

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