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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1202 1203 1204 1205 1206 1207 1208 1209 1210 ... 1720 1721 » 60251-60300 / 86044 show all
dgrover-gatk	INDEL	I16_PLUS	segdup	hetalt	100.0000	100.0000	100.0000	97.3154	4	0	4	0	0
dgrover-gatk	INDEL	I16_PLUS	segdup	homalt	97.4359	100.0000	95.0000	94.6524	19	0	19	1	0	0.0000
dgrover-gatk	INDEL	I16_PLUS	segdupwithalt	*		0.0000		100.0000	0	0	0	0	0
dgrover-gatk	INDEL	I16_PLUS	segdupwithalt	het		0.0000		100.0000	0	0	0	0	0
dgrover-gatk	INDEL	I16_PLUS	segdupwithalt	hetalt		0.0000		100.0000	0	0	0	0	0
dgrover-gatk	INDEL	I16_PLUS	segdupwithalt	homalt		0.0000		100.0000	0	0	0	0	0
dgrover-gatk	INDEL	I16_PLUS	tech_badpromoters	*	100.0000	100.0000	100.0000	73.3333	4	0	4	0	0
dgrover-gatk	INDEL	I16_PLUS	tech_badpromoters	het	100.0000	100.0000	100.0000	75.0000	2	0	2	0	0
dgrover-gatk	INDEL	I16_PLUS	tech_badpromoters	hetalt		0.0000		100.0000	0	0	0	0	0
dgrover-gatk	INDEL	I16_PLUS	tech_badpromoters	homalt	100.0000	100.0000	100.0000	66.6667	2	0	2	0	0
dgrover-gatk	INDEL	I1_5	*	*	99.5294	99.3841	99.6753	59.0782	149736	928	149786	488	385	78.8934
dgrover-gatk	INDEL	I1_5	*	het	99.6919	99.6799	99.7038	61.0342	78788	253	78770	234	135	57.6923
dgrover-gatk	INDEL	I1_5	*	hetalt	97.2805	94.7387	99.9625	62.4322	10606	589	10669	4	4	100.0000
dgrover-gatk	INDEL	I1_5	*	homalt	99.7224	99.8577	99.5874	55.4630	60342	86	60347	250	246	98.4000
dgrover-gatk	INDEL	I1_5	HG002complexvar	*	99.7285	99.6044	99.8530	57.2674	33231	132	33279	49	38	77.5510
dgrover-gatk	INDEL	I1_5	HG002complexvar	het	99.7798	99.6646	99.8952	58.2404	18128	61	18108	19	9	47.3684
dgrover-gatk	INDEL	I1_5	HG002complexvar	hetalt	98.0896	96.4658	99.7691	70.7729	1665	61	1728	4	4	100.0000
dgrover-gatk	INDEL	I1_5	HG002complexvar	homalt	99.8663	99.9256	99.8070	53.0009	13438	10	13443	26	25	96.1538
dgrover-gatk	INDEL	I1_5	HG002compoundhet	*	96.3058	95.1360	97.5048	66.8717	11755	601	11762	301	300	99.6678
dgrover-gatk	INDEL	I1_5	HG002compoundhet	het	95.2481	98.5882	92.1269	86.8653	838	12	784	67	66	98.5075
dgrover-gatk	INDEL	I1_5	HG002compoundhet	hetalt	97.2852	94.7392	99.9718	57.2014	10589	588	10650	3	3	100.0000
dgrover-gatk	INDEL	I1_5	HG002compoundhet	homalt	73.8739	99.6960	58.6762	88.9153	328	1	328	231	231	100.0000
dgrover-gatk	INDEL	I1_5	decoy	*		0.0000		100.0000	0	0	0	0	0
dgrover-gatk	INDEL	I1_5	decoy	het		0.0000		100.0000	0	0	0	0	0
dgrover-gatk	INDEL	I1_5	decoy	hetalt		0.0000		100.0000	0	0	0	0	0
dgrover-gatk	INDEL	I1_5	decoy	homalt		0.0000		100.0000	0	0	0	0	0
dgrover-gatk	INDEL	I1_5	func_cds	*	99.4505	100.0000	98.9071	35.1064	180	0	181	2	0	0.0000
dgrover-gatk	INDEL	I1_5	func_cds	het	98.3607	100.0000	96.7742	42.5926	59	0	60	2	0	0.0000
dgrover-gatk	INDEL	I1_5	func_cds	hetalt	100.0000	100.0000	100.0000	33.3333	2	0	2	0	0
dgrover-gatk	INDEL	I1_5	func_cds	homalt	100.0000	100.0000	100.0000	30.4094	119	0	119	0	0
dgrover-gatk	INDEL	I1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	94.7315	91.7481	97.9155	67.3720	1690	152	1691	36	30	83.3333
dgrover-gatk	INDEL	I1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	97.1228	96.5257	97.7273	78.8316	639	23	602	14	8	57.1429
dgrover-gatk	INDEL	I1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	92.5220	86.1761	99.8768	41.7921	773	124	811	1	1	100.0000
dgrover-gatk	INDEL	I1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	95.5326	98.2332	92.9766	69.7368	278	5	278	21	21	100.0000
dgrover-gatk	INDEL	I1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*	100.0000	100.0000	100.0000	99.8652	1	0	1	0	0
dgrover-gatk	INDEL	I1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
dgrover-gatk	INDEL	I1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	97.0588	1	0	1	0	0
dgrover-gatk	INDEL	I1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
dgrover-gatk	INDEL	I1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	98.9205	98.2346	99.6161	72.9579	15302	275	15309	59	45	76.2712
dgrover-gatk	INDEL	I1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	99.5152	99.4428	99.5877	78.3498	6068	34	6039	25	11	44.0000
dgrover-gatk	INDEL	I1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	97.9387	96.0088	99.9477	63.4628	5701	237	5737	3	3	100.0000
dgrover-gatk	INDEL	I1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	99.5071	99.8869	99.1302	72.8167	3533	4	3533	31	31	100.0000
dgrover-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	98.4673	97.4995	99.4544	67.8523	15675	402	15676	86	70	81.3953
dgrover-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	99.0909	98.7850	99.3987	76.0252	6342	78	6282	38	24	63.1579
dgrover-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	97.3638	94.8948	99.9647	39.6673	5595	301	5656	2	2	100.0000
dgrover-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	99.0855	99.3885	98.7844	71.5296	3738	23	3738	46	44	95.6522
dgrover-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	*	97.7564	96.8254	98.7055	66.0626	610	20	610	8	5	62.5000
dgrover-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	het	98.2507	97.3988	99.1176	69.3969	337	9	337	3	0	0.0000
dgrover-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	hetalt	93.6709	88.0952	100.0000	59.7826	74	10	74	0	0
dgrover-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	98.5149	99.5000	97.5490	61.2167	199	1	199	5	5	100.0000

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