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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1128 1129 1130 1131 1132 1133 1134 1135 1136 ... 1720 1721 » 56551-56600 / 86044 show all
egarrison-hhga	SNP	ti	segdup	hetalt	100.0000	100.0000	100.0000	99.1189	2	0	2	0	0
egarrison-hhga	SNP	ti	segdup	homalt	99.8003	99.9067	99.6942	88.4424	7498	7	7498	23	23	100.0000
egarrison-hhga	SNP	ti	segdupwithalt	*		0.0000		100.0000	0	0	0	0	0
egarrison-hhga	SNP	ti	segdupwithalt	het		0.0000		100.0000	0	0	0	0	0
egarrison-hhga	SNP	ti	segdupwithalt	hetalt		0.0000		100.0000	0	0	0	0	0
egarrison-hhga	SNP	ti	segdupwithalt	homalt		0.0000		100.0000	0	0	0	0	0
egarrison-hhga	SNP	ti	tech_badpromoters	*	100.0000	100.0000	100.0000	46.5409	85	0	85	0	0
egarrison-hhga	SNP	ti	tech_badpromoters	het	100.0000	100.0000	100.0000	46.9880	44	0	44	0	0
egarrison-hhga	SNP	ti	tech_badpromoters	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
egarrison-hhga	SNP	ti	tech_badpromoters	homalt	100.0000	100.0000	100.0000	46.0526	41	0	41	0	0
egarrison-hhga	SNP	tv	*	*	99.8815	99.8074	99.9558	20.9138	967822	1868	967852	428	112	26.1682
egarrison-hhga	SNP	tv	*	het	99.8548	99.7659	99.9438	20.8578	590311	1385	590332	332	44	13.2530
egarrison-hhga	SNP	tv	*	hetalt	99.1394	99.1963	99.0826	48.4024	864	7	864	8	8	100.0000
egarrison-hhga	SNP	tv	*	homalt	99.9252	99.8738	99.9766	20.9039	376647	476	376656	88	60	68.1818
egarrison-hhga	SNP	tv	HG002complexvar	*	99.7884	99.6287	99.9487	21.8626	245238	914	245267	126	78	61.9048
egarrison-hhga	SNP	tv	HG002complexvar	het	99.7360	99.5170	99.9560	21.2359	150003	728	150023	66	28	42.4242
egarrison-hhga	SNP	tv	HG002complexvar	hetalt	98.7097	98.7097	98.7097	42.0561	306	4	306	4	4	100.0000
egarrison-hhga	SNP	tv	HG002complexvar	homalt	99.8748	99.8086	99.9410	22.7459	94929	182	94938	56	46	82.1429
egarrison-hhga	SNP	tv	HG002compoundhet	*	98.7023	98.0164	99.3979	47.2112	8746	177	8749	53	39	73.5849
egarrison-hhga	SNP	tv	HG002compoundhet	het	98.2001	96.8971	99.5386	52.4849	4528	145	4530	21	10	47.6190
egarrison-hhga	SNP	tv	HG002compoundhet	hetalt	99.5928	99.3039	99.8833	23.6185	856	6	856	1	1	100.0000
egarrison-hhga	SNP	tv	HG002compoundhet	homalt	99.1596	99.2326	99.0866	43.1871	3362	26	3363	31	28	90.3226
egarrison-hhga	SNP	tv	decoy	*		0.0000		100.0000	0	0	0	0	0
egarrison-hhga	SNP	tv	decoy	het		0.0000		100.0000	0	0	0	0	0
egarrison-hhga	SNP	tv	decoy	hetalt		0.0000		100.0000	0	0	0	0	0
egarrison-hhga	SNP	tv	decoy	homalt		0.0000		100.0000	0	0	0	0	0
egarrison-hhga	SNP	tv	func_cds	*	99.9543	100.0000	99.9086	28.4546	4371	0	4371	4	0	0.0000
egarrison-hhga	SNP	tv	func_cds	het	99.9248	100.0000	99.8497	29.2851	2657	0	2657	4	0	0.0000
egarrison-hhga	SNP	tv	func_cds	hetalt	100.0000	100.0000	100.0000	56.5217	10	0	10	0	0
egarrison-hhga	SNP	tv	func_cds	homalt	100.0000	100.0000	100.0000	26.8356	1704	0	1704	0	0
egarrison-hhga	SNP	tv	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	98.2141	97.8892	98.5411	67.8190	1484	32	1486	22	10	45.4545
egarrison-hhga	SNP	tv	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	97.9773	97.5806	98.3773	68.8271	968	24	970	16	5	31.2500
egarrison-hhga	SNP	tv	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt		0.0000		100.0000	0	0	0	0	0
egarrison-hhga	SNP	tv	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	98.6616	98.4733	98.8506	65.3846	516	8	516	6	5	83.3333
egarrison-hhga	SNP	tv	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
egarrison-hhga	SNP	tv	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
egarrison-hhga	SNP	tv	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt		0.0000		100.0000	0	0	0	0	0
egarrison-hhga	SNP	tv	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
egarrison-hhga	SNP	tv	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	99.5328	99.2846	99.7822	62.2610	27480	198	27491	60	36	60.0000
egarrison-hhga	SNP	tv	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	99.4577	99.1576	99.7596	63.2532	17420	148	17430	42	21	50.0000
egarrison-hhga	SNP	tv	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	96.2963	100.0000	92.8571	80.2817	13	0	13	1	1	100.0000
egarrison-hhga	SNP	tv	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	99.6677	99.5048	99.8311	60.3522	10047	50	10048	17	14	82.3529
egarrison-hhga	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	98.9850	98.7098	99.2618	74.4815	14383	188	14387	107	31	28.9720
egarrison-hhga	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	98.7264	98.4342	99.0203	74.1270	8990	143	8995	89	19	21.3483
egarrison-hhga	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	100.0000	100.0000	100.0000	92.7536	15	0	15	0	0
egarrison-hhga	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	99.4177	99.1702	99.6664	74.8848	5378	45	5377	18	12	66.6667
egarrison-hhga	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	*	99.1405	99.2515	99.0299	57.3248	1326	10	1327	13	3	23.0769
egarrison-hhga	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	het	98.8929	99.1813	98.6063	58.3656	848	7	849	12	3	25.0000
egarrison-hhga	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	hetalt		0.0000		100.0000	0	0	0	0	0
egarrison-hhga	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	99.5833	99.3763	99.7912	54.8113	478	3	478	1	0	0.0000

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