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Explore HG002 comparison results
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Entry TypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
55351-55400 / 86044 show all
eyeh-varpipeINDELD6_15func_cds*
87.9743
83.7209
92.6829
46.7532
3673833
100.0000
eyeh-varpipeINDELD6_15func_cdshet
89.6552
89.6552
89.6552
38.2979
2632633
100.0000
eyeh-varpipeINDELD6_15func_cdshetalt
66.6667
50.0000
100.0000
66.6667
11200
eyeh-varpipeINDELD6_15func_cdshomalt
85.7143
75.0000
100.0000
58.3333
931000
eyeh-varpipeINDELD6_15lowcmp_AllRepeats_51to200bp_gt95identity_merged*
41.7793
36.0397
49.6933
42.7847
14162513145814761368
92.6829
eyeh-varpipeINDELD6_15lowcmp_AllRepeats_51to200bp_gt95identity_mergedhet
73.7801
62.4350
90.1639
54.2729
6003615506048
80.0000
eyeh-varpipeINDELD6_15lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
18.7138
10.4396
90.2235
66.4165
24721193233530
85.7143
eyeh-varpipeINDELD6_15lowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
45.2624
94.5183
29.7558
27.9326
5693358513811290
93.4106
eyeh-varpipeINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_merged*
59.5745
66.6667
53.8462
93.8095
42766
100.0000
eyeh-varpipeINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
88.8889
100.0000
80.0000
95.3271
30411
100.0000
eyeh-varpipeINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
02000
eyeh-varpipeINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
54.5455
100.0000
37.5000
88.8889
10355
100.0000
eyeh-varpipeINDELD6_15lowcmp_AllRepeats_lt51bp_gt95identity_merged*
70.9466
66.7041
75.7654
53.5142
1070453431086434753422
98.4748
eyeh-varpipeINDELD6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
90.2411
88.1901
92.3898
58.0809
49366614589378364
96.2963
eyeh-varpipeINDELD6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
51.7828
35.4521
96.0081
54.3492
241543972862119117
98.3193
eyeh-varpipeINDELD6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
67.6237
92.1660
53.4032
48.7367
3353285341329782941
98.7576
eyeh-varpipeINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331*
66.0309
61.2472
71.6250
49.8874
1082368481083442924156
96.8313
eyeh-varpipeINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331het
88.2450
85.0667
91.6700
56.4134
49738734523411383
93.1873
eyeh-varpipeINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
45.2414
29.6315
95.6081
53.7572
238856712830130123
94.6154
eyeh-varpipeINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331homalt
63.1837
91.9278
48.1333
41.9722
3462304348137513650
97.3074
eyeh-varpipeINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged*
79.2133
76.5550
82.0628
67.6812
160491834033
82.5000
eyeh-varpipeINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhet
87.7794
88.9764
86.6142
67.2680
113141101711
64.7059
eyeh-varpipeINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
54.6624
38.4615
94.4444
73.7226
15243422
100.0000
eyeh-varpipeINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
69.3912
74.4186
65.0000
63.6364
3211392120
95.2381
eyeh-varpipeINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
47.6190
50.0000
45.4545
94.3878
22566
100.0000
eyeh-varpipeINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
85.7143
100.0000
75.0000
96.0784
20311
100.0000
eyeh-varpipeINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
02000
eyeh-varpipeINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
28.5714
89.5522
00255
100.0000
eyeh-varpipeINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged*
79.3931
78.6070
80.1951
58.1462
790215822203195
96.0591
eyeh-varpipeINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhet
85.0896
95.8333
76.5120
54.1586
55224544167161
96.4072
eyeh-varpipeINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
61.5224
45.4545
95.1613
80.3175
25305933
100.0000
eyeh-varpipeINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
68.8100
56.9519
86.9048
56.7753
2131612193331
93.9394
eyeh-varpipeINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged*
79.4291
78.9108
79.9542
56.7822
681182698175172
98.2857
eyeh-varpipeINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
84.7659
96.9199
75.3205
52.5114
47215470154152
98.7013
eyeh-varpipeINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
69.2308
54.5455
94.7368
83.3333
18153622
100.0000
eyeh-varpipeINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
69.0901
55.6851
90.9953
55.8577
1911521921918
94.7368
eyeh-varpipeINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged*
41.1142
35.4136
49.0020
38.2625
97617809821022950
92.9550
eyeh-varpipeINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhet
73.1236
61.8658
89.3899
45.9110
3782333374035
87.5000
eyeh-varpipeINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
19.0780
10.6557
91.0204
63.7574
18215262232220
90.9091
eyeh-varpipeINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhomalt
46.2389
95.1945
30.5355
26.2146
41621422960895
93.2292
eyeh-varpipeINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
86.6667
20200
eyeh-varpipeINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
80.0000
10100
eyeh-varpipeINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
eyeh-varpipeINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
83.3333
10100
eyeh-varpipeINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged*
62.8790
57.8527
68.8617
41.8554
79755810793735893504
97.6317
eyeh-varpipeINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhet
88.6180
82.8379
95.2651
48.0962
32056642857142132
92.9577
eyeh-varpipeINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
44.0002
28.5292
96.1301
45.3174
2029508323359492
97.8723
eyeh-varpipeINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhomalt
61.6432
97.7532
45.0148
36.4990
274163274533533280
97.8228
eyeh-varpipeINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged*
67.7487
63.3008
72.8688
42.9423
70154067697525972576
99.1914
eyeh-varpipeINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhet
91.1773
86.7440
96.0881
48.8639
2840434253010398
95.1456